Oreochromis niloticus (Nile tilapia): 102077873
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Entry
102077873 CDS
T06104
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102077873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
102077873
03021 Transcription machinery [BR:
onl03021
]
102077873
03036 Chromosome and associated proteins [BR:
onl03036
]
102077873
Transcription factors [BR:
onl03000
]
Eukaryotic type
Helix-turn-helix
ARID
102077873
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102077873
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102077873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
102077873
NCBI-ProteinID:
XP_005477739
LinkDB
All DBs
Position
LG19:28735094..28902302
Genome browser
AA seq
2296 aa
AA seq
DB search
MAAQVASAPTRTNSKNKKLAGGLGPELNSGKSGGGGTGQRTGPMLAAGDGTLNNVDNHRR
NELSMVHSTSTSHGAPDGHDKAGNNLASATASTNSSASSMESSLIANHKLKCAGSGDPPQ
SQPPQQPPPQFGQFAPHQQRQIQSNNSASNNGQVPRGDRSADHQHHSGKENLLGGQEEPQ
QQHMTGKGEGELTCKPSERMMAARYEHSNLGPPSNNSEFNNNYYTPRPCYEQHGGQQQQS
SGMGITHSSAHNSMENSHEAGYHNSQYGQYPAYRAGYGGGGYGMMGPSGCRQPGNMMMGS
NSSASHGKSPLGAASAGFQRFPGQTQPQQQQQHPSGATPTLNQLLTSPSPMMRGYGGAYQ
DYSGPAAQQQAGMGPGKDVGSQYGATSAHWGGQQRSHPHAMNPGNATQGLGRTQVSSMDF
MAMKRSQLYGMSNNPYSAPQQPGAGPYPPSQPYASPPPHRYPMSLQGRGQMGMGGMQYPQ
QQQVVPYGQQGMVGYSQQQQQQQQQGGQQGTPPYFSPPHQTPPGPTPSSYLQPRPPLQQE
AQQESYSIRGPTPGNSGKANNEDNVSHERPSSLPDLSGSIDDLPTGEAGLGSAVGAGGSS
SSSSSSQGEQGSTGNQGQSPFSPHASPHLPSQRSGPSPSPVGSPAGSTQSQQSRSGSGPI
SPASAPSANTSVPGSAMAPQSSGNGPDGGHPPITRSPMAQERGFNMQRNQAASQFASPQT
GPPMSPHPSPGGPLYSGVGPYSQGGPAGPYGPHAPQYGHQGNYARPSNYSGTASTGYSGP
GPGVTNSLGMNATSPMHGQGPGQPVPGGRGHGPGSQNRVYPAMGPTSPSVPQPAGPGMGP
PSLGSSNRKTQEAAAAAVPGSANSVHNRTPLYARPPAQTQPTSTRWPTPHHSSTCPLPSP
PPRPHPPCIHSHQHRQSNYQGPGMSQASAVPYSQPAGSNAAATGNAQGPGYNMPPSGSMG
MSGDGIMSPDAKPKMDVKDDSGPANEPHKPKLPDVYVNNNSGGGSQQCVSQPPTPGGALP
VPSPXSPSPASLSSYHGDDSDSISSPPWPLKTPSSPKANPNASPFSGERITRLYELGGEP
ERRGWVERYLNFMEERGTPVSQLPTVGKKPLDLWKLYMAVREIGGLAMVNKNKKWRELSS
TLNVGTSSSTASSLKKQYIQYLFAYECKMERGEDPPADNSSSSSSMAGGDNRKQVKIQPP
SPANSGGSLQGPQTPQSSASSSTAEAAGDLKPPTPATTPLGQVTPLPPNRSSVSVQDPFS
EVSDPAFQKRTPALPPSAPYQQGLSMPDMMMRMQYDAKDPFAGMRKMAGADPYIPAQMPG
SGMQDMYGRPPSALSMSQRSQYPYGPGYDRRPDHIMGMEGTMGPPGSQNNMGPSNSEGSM
YSPSRYSSQQRHDGYGQQYSNMPYGMHPSGMYPQQQQGYKRPLDGMYGPPPKRHEGDMYA
MQYTNQQPDMYNHYGSGYSEHRPLQGQFPYPYPRDRMAPSGQSQHSMLGGGPPPNHAADG
PNMWPSRTDLGYPYPSRPGSQMPPYGSMGRDDMDGRPGPEQWHRQSPYMSSSGGMPPLSS
RQPSSYSNSPSMANHLPRAPSPGAFQRSMDSRLSPSKAPFMSPMKMPKPGLAMMGSQGGG
PMGQFPPNLRRDLNYPPGSVEGTLPILKPRRKLTSKDSGTPEAWRVMMSLKSGLLAESTW
ALDTINILLYDDSTVASFNLSQLPGFLELIVEYFRRCLIEIFGILEEFEVGTKKRSSSPA
SAQKERPEWDSGSPVQPELSKAEETQVEHAEGVTEEVTPVAAEPAKVNGETEESNMSVSR
EDKSGEDGEKEGKEEEEEAAEGEAESVDRPAAEGQPKPKQASKYDKFPIKIVHKEDLRDD
MSGYLTEFTSGLRHWQAGGGDSTAHIQTHFEPWSEAPEDEDRRNKSKQENKMDHEKKQPL
KNITATIDDVLCARVDALAYGHPARSLPSYPFRVHPDGEEDHITLLEDEPRCLDEAPLTT
TSAWQDSLSKRCICVSNIVRSLSFIPGNDLDMSRHPALVLLLGRLLLLHHVHPERNRLPP
SFQRDEHQERGLSSSKDEWWWECLSLLRENAMVTLANIAGQLDLSTYPDTICLPILDGLL
HWMVCPSAEAQDPFPSAGPHSQLTPQRLVLECLCKLSIQEGNVDLLLATPPFSRQEKLFT
VLVRYVGQRKAQVYREMAVAVLSHLAQGDPTAARAIAMQKGSVGNLVVFLEDGVSMAQYQ
QNPHSLLHMGHPPMDPPSINMMCRAAKGLLAMAKLQENKKEFVLYESRLLDISISSVLNV
GVVAIICQVLFHLGKL
NT seq
6891 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaagtggcatcggctccgaccagaaccaacagcaaaaataagaaactagcc
ggcggtctgggtcccgagctcaattcggggaaatccggaggaggaggtacaggacagcga
acgggaccgatgctggctgctggagatgggactctgaataatgtagataatcaccgccgg
aacgagctcagcatggtccattcaacttccacgagtcacggcgctccggacggacacgac
aaggctgggaataacctcgcgtccgccacggcgtcgactaattcgagcgcttcctcgatg
gagtcgagtttgatcgcgaaccacaagctgaagtgtgcggggagcggagatccccctcag
tctcagccaccgcagcagccgccgccgcaattcggccagtttgcgccacatcagcagcgg
cagatccaaagtaacaacagcgccagtaacaacggccaggtgccccgcggggacaggagc
gcggatcaccaacaccacagcggcaaagagaacctgttggggggccaggaggagccacag
cagcagcacatgacagggaaaggtgaaggggagctcacctgtaagccctccgagaggatg
atggccgccaggtacgagcactcgaacttggggccaccgagtaacaactccgagttcaat
aacaactattacactccgaggccctgctacgagcaacatggcgggcagcagcaacaaagc
agcgggatggggataacgcactcctcggcacataacagcatggagaactcccacgaagca
gggtaccacaacagccagtacggccagtatcccgcctaccgagcgggctacggcggcggg
ggctacgggatgatgggcccctctggatgtcggcaacctgggaacatgatgatgggcagc
aactcctctgcgagccacggcaagtctcctttgggagctgcttcggctggcttccagagg
ttcccgggacaaacccagccgcagcagcagcagcagcatccctcgggggcgaccccgacc
ctcaaccaactgctgacgtcccccagcccgatgatgcggggctacgggggtgcttatcag
gactacagtggccctgcggctcagcagcaagccggcatgggcccggggaaagacgtgggg
tcccagtatggagccacttcggcccactggggagggcagcagaggagccatccacacgca
atgaatcctggaaacgcaacgcagggcctcggcaggacgcaggtttcctccatggacttc
atggctatgaagcgctcgcagctgtacggcatgtccaacaatccctactccgccccgcag
cagccgggggccggaccctatccccccagccagccctacgcatcgcctcccccgcatcga
tacccgatgagcctacaggggaggggtcaaatgggcatgggtgggatgcagtatcctcag
cagcagcaggtggtgccatatggccaacaggggatggttggatacagccagcagcagcag
cagcagcagcagcaaggggggcagcagggaacccctccgtacttcagcccccctcatcag
acccctccaggaccaaccccaagctcctacctgcagcctcggccgccactgcaacaggag
gcccagcaggagagctacagcatcaggggtcctaccccagggaattctgggaaggctaac
aatgaggataacgtctcccatgaacgcccctcaagtctgccggatctgtccggctccatt
gacgacctccccaccggggaggctggcctgggctcggccgtcggcgccgggggctcctcc
agcagcagcagcagtagccaaggggagcagggaagcaccggtaaccagggacagtccccc
ttctcccctcacgcctccccgcacctccccagccagaggagcgggccctctccgtccccc
gtcggctccccggccggctccactcagtcccagcagtcccgctcgggttcaggccccatc
tcacctgccagcgcaccctctgccaacacctctgtgccaggttcagccatggccccgcag
agctctggaaacggacctgatggaggtcacccgccaatcacacgctcacctatggctcag
gagagagggttcaacatgcagaggaaccaggctgcctctcagtttgcgtctccacagacc
ggacctcccatgtccccccacccatcgccagggggccccctctactctggagtgggcccg
tactcccagggtggccccgcgggcccttatggaccgcacgcacctcagtatggacaccaa
ggcaactacgcacggccctccaactacagcgggacagccagcaccggctacagtggcccc
ggccccggcgtaaccaacagcctgggcatgaacgctaccagccccatgcacggccagggg
cccggccagcccgtgcccggaggacgcggccacggcccaggcagccagaacagggtgtac
ccggccatgggtcccacttctcccagcgtaccccagccagctgggcccgggatgggtccc
ccttctttgggtagctctaaccgcaagacccaggaggcggcagcggctgccgtgccggga
tctgccaactcagtgcacaacaggacgcctctgtacgcgaggcccccagcccagacgcag
cccacctccacccgctggcccacaccccaccattcctccacctgtccactgccttcaccc
cctccccgacctcatcctccatgcatccattcgcatcaacataggcagagcaactaccaa
ggccccggcatgagccaagccagcgctgtcccctacagtcagccagcgggcagcaacgcc
gcagccacaggcaacgcacaaggtcctggctacaacatgcctccttcaggatccatggga
atgtcaggagacgggataatgagcccagatgccaaaccgaaaatggacgtgaaagatgac
agcggccccgccaacgagccccacaaaccaaagctcccggacgtttacgtcaacaataac
agcggcggcggctcccagcagtgcgtttcccagccacccactccgggcggcgccctacct
gtgccctcccccntctcacccagccccgccagcctctcctcctaccacggagatgacagc
gacagcatcagcagccccccctggcctctcaagactccctccagccccaaagccaaccct
aacgcctctccgttcagcggcgagcgaatcacgcggctgtacgagctcggtggagagccg
gagagacgaggctgggtggagcgttacctgaacttcatggaggagcggggcacacctgtt
agtcagcttcccactgtgggcaagaagccgctggacctgtggaagctctacatggctgtt
cgggaaataggaggcctcgccatggtaaacaagaacaagaagtggcgtgagctgtccagc
accctgaacgtgggtacatccagcagcaccgccagctcgctcaagaagcagtacatccag
tatctgtttgcctacgagtgcaagatggagaggggagaagacccgccagcggacaacagc
agcagtagcagcagcatggctggaggggacaacaggaagcaggtcaagatccagccgcct
tcacctgctaattcaggcggctccctccagggcccacagacgcctcagtcctctgccagc
agctctacagcagaggcagcgggggacctgaagccccccacgcctgccaccacccccctg
ggacaggtcacaccactgccccccaacaggagcagtgtgagcgtgcaggaccccttctca
gaggtgagcgacccggccttccagaagcggactcccgccctgcccccctcggctccgtac
cagcagggcctcagcatgcctgacatgatgatgaggatgcagtacgatgccaaggacccc
tttgccgggatgaggaagatggcaggagccgatccttatattccagcccagatgcccgga
agcggtatgcaggacatgtatggtcgacccccatcagccctgagcatgagccaaaggtcg
cagtacccgtatgggccgggctacgacaggagaccggaccatataatggggatggagggg
accatgggcccccctgggagccagaacaacatgggaccttccaacagtgagggcagcatg
tactcacccagcagatactcctcacagcagagacacgacggctacgggcagcagtattcc
aacatgccatacgggatgcatccatctgggatgtacccacagcagcagcagggctacaaa
cgtccgctggatggaatgtacggccccccgcccaagagacacgagggcgacatgtacgcc
atgcagtacaccaaccagcagccggacatgtacaaccactacggcagcggttactctgaa
cacagaccgctccagggacagttcccctacccgtacccccgcgaccgtatggccccctcg
ggccagagccagcacagtatgctgggcgggggcccccctcctaatcacgctgccgacggg
cccaacatgtggccttcgaggacagacctcggctacccctaccccagcaggccgggatca
caaatgcccccgtacggctcgatgggcagagacgacatggacgggcggcccgggccggag
cagtggcaccggcagtctccgtacatgtcatcatcgggcggcatgccccccctgtcctca
cgccagccatcgtcctattccaactccccgtccatggccaaccacctgcccagagcgccg
agcccaggggccttccagcgctccatggactctcgactgtcccccagcaaagcgcctttc
atgtcccccatgaagatgcctaaacccggcctggccatgatgggatcgcagggcggtgga
cccatggggcagtttcctcctaatctgaggagggaccttaactacccaccgggttcagtg
gagggcaccctgccgattctcaagcctcgacgcaagctaacatccaaggacagtggaacg
cctgaggcctggcgcgtgatgatgtctctgaagtctggcctgctggcagagagcacgtgg
gcgctagataccatcaatatcctgctgtacgatgacagcacagtggcctcctttaacctc
tcccagttgcctggattcctcgagctcatcgtcgagtacttccgccgttgcttgattgag
atctttggcatcctggaagagtttgaggtggggactaagaaacggtcctcaagtccagcg
tctgcacagaaagaaagacctgagtgggattctggctctcctgtccagcctgagctctcc
aaagccgaggagacccaggtggagcatgccgagggcgtcacggaggaagtgacacctgtc
gctgcagagccggccaaggtgaacggcgaaacagaggagtccaacatgagcgttagcagg
gaggacaagagtggagaagatggtgaaaaggagggaaaagaagaagaagaggaggcagca
gagggtgaagcagagtccgtggatcggcccgcagcagagggacagcctaaacccaaacaa
gccagcaaatacgacaagttccccatcaagattgttcacaaagaggacctgagggacgac
atgtccggttacctcacagagtttaccagcgggctgcggcattggcaggcgggtggaggc
gactccacggcacacattcagacacactttgaaccctggagtgaagcgcccgaggatgaa
gacaggagaaacaagagcaaacaggagaataagatggaccacgaaaagaagcagcctctg
aaaaacatcaccgcgactatcgacgacgttctgtgcgcccgcgttgacgccctcgcttac
ggccaccccgcgcgctccttgccctcttaccccttcagggtgcacccagatggggaggag
gaccacatcaccttgctggaggatgagccacgctgcctggacgaggctccgctcaccacc
acgtctgcctggcaggactcgctgtccaagcggtgcatctgcgtctccaacatcgtgcgg
agtctgtcctttatccctgggaatgacttggacatgtcccgccaccctgctctggttctt
ctgctgggcaggctgcttctgctgcaccacgtgcaccccgagaggaacaggttacctccc
agcttccaaagagacgagcaccaggagcgggggctgtcgagcagtaaggacgagtggtgg
tgggagtgtctgagtctgctcagggagaacgccatggtcactctggccaacatcgctggc
cagttggatctctccacttacccagataccatctgccttcccatcctggacggcctcctc
cactggatggtttgcccctcagccgaagcccaggacccctttccgtcggctggaccccat
tctcagctcaccccccagaggctggtgctggaatgcctctgcaagctgagcatccaggag
ggcaacgtggacctcctgctggcaacgccgccattcagccgacaggagaaactgttcacg
gtcctggtgcgctacgtgggtcagaggaaggcccaggtgtacagggagatggcggtggct
gtgctctcccacctggcacagggagaccccacagcggcgcgtgccatagccatgcagaag
ggcagcgtgggtaacctggtagttttcttggaggacggcgttagcatggcgcagtatcag
cagaaccctcacagcctgctgcacatgggccaccctcccatggacccgcccagtataaac
atgatgtgcagagcagctaaaggcctcctggctatggccaaactgcaagagaacaagaaa
gagtttgtactgtatgaaagcagattattagacatctccatctcctcggtgctcaatgtg
ggagtggttgccattatttgccaagtcctgtttcacttggggaagttatga
DBGET
integrated database retrieval system
