Oreochromis niloticus (Nile tilapia): 102082505
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Entry
102082505 CDS
T06104
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
102082505
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102082505
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-RING_2
zf-RING_5
U-box
Prok-RING_4
zf-RING_10
zf-Nse
zf-RING_6
DUF5694
Y1_Tnp
Motif
Other DBs
NCBI-GeneID:
102082505
NCBI-ProteinID:
XP_019219717
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Position
LG10:23283828..23292492
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AA seq
556 aa
AA seq
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MAQQTIQLDQEKLSCSICLQLLKDPVTIPCGHSYCMDCIKNYWDEKETHSCPQCRQIFTP
RPVLVKNTMLAELVEDLKKAEHPTASSDYACGPGDVFCSERKQKGSKSCLVCMASNCEHH
LQPHYSVSPPKKHKLIKATSKLQENICPRHDEVMKIFCRTDQQCICYLCLMDEHKDHDTV
SAAAERAERQKELGRNRQKFLQRVQEREKDVKMLHRKVEAINLSADKAFRECDKAFKDLI
SLIEKKSSEGKQKIRSKQKAEQNRVKELQEKIEQEIRDLRRRDTELQQLSLTEDHLHFLN
SYSSLSHLSASTNVPTYNNVTLQYFEDVTASVSRTRDKVKALLSDEWPKISVGMTKADIL
LPQGEPKTRDEFLKYSCQITLDPNTAHTLLSLSDSNRKVTLMSRNQSYLSHPDKFLDCRQ
VLSREGLTGRCYWEVKCNGMVGVAVAYKDIDRRGTREECGFGLNDKSWALTVSDRSYEFK
HNNIPTPIPGPLSSRIGVYLDHRAGTLSFYSITETMNLLHRVQTRFTQSLYVGLWLPQSA
GHTAEVCELKKRINIK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcagacgattcagctggatcaagaaaaactgagctgttccatctgtctgcaa
cttctaaaggatccagtcactattccctgtgggcacagctactgcatggactgtatcaaa
aactactgggatgagaaggaaacacacagctgccctcagtgcaggcagattttcacacca
cggcctgtcctggtgaagaacaccatgttagctgagttagtggaggacctaaagaaagca
gaacatccgacagcttcatctgattatgcctgtggacctggagatgtgttctgttctgag
aggaagcaaaaaggctccaagtcctgcctggtgtgtatggcctctaattgtgagcatcac
ctccagcctcactacagcgtatctccaccaaagaaacacaagctcatcaaagccacttca
aagcttcaggagaacatctgtcctcgccatgatgaggtgatgaagatcttctgccgcact
gatcagcagtgtatctgttatctctgcttaatggatgaacacaaagaccatgacacagtg
tcagctgcagcagaaagagctgagaggcagaaagagcttggacgaaatcggcaaaaattt
cttcaaagagttcaggaaagagagaaagatgtgaagatgcttcatcggaaagtggaggct
atcaatctttctgctgataaagctttcagagaatgtgataaggctttcaaagacttgatc
agtctcattgagaaaaaaagctctgaagggaagcagaagatcagatccaaacaaaaagcg
gaacagaacagagtcaaagagcttcaggagaaaatagagcaggagatcagagatcttagg
aggagagacactgaactgcagcagctctcactgactgaggatcacctccattttctgaac
agctactcctcactgtcacatctgagtgcatctacaaacgtacccacctacaacaatgtt
actctgcagtactttgaggatgtgactgcatctgtgtcacggaccagagataaagtgaag
gctcttctcagtgatgaatggccaaaaatctcagttggaatgaccaaagcagatatttta
ctgcctcaaggagaacccaaaaccagagacgaatttttgaaatattcttgtcagatcact
ctcgatccaaatacagcacacacactgttgtcactgagtgacagcaacagaaaagtaaca
ctgatgagtagaaaccagtcatatctgagtcatccagacaaattccttgattgccggcag
gtcctgagcagagagggtctgactggacgttgttactgggaggtgaagtgcaacgggatg
gttggagtagctgttgcatacaaggatatcgaccgtagagggaccagagaggaatgtgga
tttggattaaatgacaaatcctgggcattaacagtttcagacaggagttatgaattcaaa
cacaacaacattcccactcccatcccaggccctctgtcctccagaataggagtatatttg
gatcacagggcaggaactctttctttctacagcatcactgagaccatgaatctcctccac
agagtccagaccaggttcactcagtctctctatgttggactgtggcttccacaaagtgct
ggacacactgctgaggtgtgtgagctcaagaagagaataaacataaaatag
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