Oreochromis niloticus (Nile tilapia): 109199364
Help
Entry
109199364 CDS
T06104
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
109199364
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109199364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
zf-Nse
U-box
zf-RING_6
TRAF3_RING
RSS_P20
Gp58
Motif
Other DBs
NCBI-GeneID:
109199364
NCBI-ProteinID:
XP_019210233
LinkDB
All DBs
Position
LG3:complement(39760256..39762164)
Genome browser
AA seq
558 aa
AA seq
DB search
MAQKGVQLDRETFSCSICLDLLKDPVTTACGHSYCRNCIKSFWDEEDRKGIHSCPQCSKT
FTPRPVLEKNVMFAALVEQLKKTGLQAAPADHCYAGPEDVACDVCTGRKLKAIKSCLVCL
ASYCEKHLQPHYDAAPLKKHKLVAPSKKLQENICSRHDEVMKIFCRTDQQSICYLCSVDE
HKGHETVPAAAERTEKQKELEVRRLNIQQRIQEREKDVKLLQQEVEAINGSADKAVEDSE
KMFTELIRLIQKRSSDVKQQVRSQQETEVSRVKELQEKLEQEIAELKRKDGELEQLSHTE
DHNQFLHNYPSLSALSESTHSSSINIRPLRYFEDVTAAVSETRDKLQDILREEWTNISLT
VTQVDVLLSPTEPKTRAGFLKYSREITLDPNTANTHLLLSAGNRKVTFMKQQKFYSDHPD
RFTVWCQVLSRESLTGRCYWEVEWRGGAVYVAVAYKNISRAGRGNECGFGWNDKSQALYC
DTNGYKLQYNKVQTVLSGPRSSRVGVYLDHRAGILSFYSISETMTLLHRVQTTFTQPLYA
GFRLGFSDGDTAELIKVK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaaaggagttcagctggaccgagaaaccttctcttgttccatctgtttggat
ctactgaaggatccggtgactacagcctgtggacacagctactgcaggaactgtattaaa
agtttctgggatgaagaggacaggaagggaatccacagctgccctcagtgtagcaagact
ttcacaccgaggcctgtcctggagaaaaacgtcatgtttgcagctttagtggagcagctg
aagaagactggactccaagctgctccagctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggaggaagctgaaagccatcaagtcctgtttagtctgtctg
gcctcttactgtgagaaacacctccaacctcactatgatgcagctccattaaagaaacac
aagctggtggccccctccaagaagctccaggagaacatctgctctcgtcatgatgaggtg
atgaagattttctgtcgtactgatcagcagagtatctgttatctttgctcagttgatgag
cataaaggccatgaaacagtcccagctgcagcagaaaggactgagaagcagaaggagctc
gaggtgagacgactaaacatccagcagagaatccaggagcgagagaaagatgtgaagctg
cttcaacaggaggtggaggccatcaatggctctgctgataaagcagtggaggacagtgag
aagatgttcactgagctgatccgtctcatccagaaaagaagctctgatgtgaagcagcag
gtcagatcccagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcgctgagctgaagaggaaagacggcgagctggagcagctctcacacacagag
gatcacaaccagtttctacacaactacccctcactgtcagcactcagtgagtctacacac
tcatccagcatcaatattcgtcctctgaggtactttgaggatgtgacagcagctgtgtca
gagaccagagataaactacaggacattctgagagaggaatggacaaacatctcactgaca
gtcactcaagtggatgttttactgtcaccaacagagccaaagaccagagctggattctta
aaatattcacgtgaaatcacactggatccaaacacagcaaacacacatctgttattatct
gcggggaacagaaaagtaacatttatgaaacaacaaaagttttattctgatcatccagac
agattcactgtatggtgtcaggttctgagtagagagagtctgactggacgttgttactgg
gaggtggagtggagagggggagcagtttatgtcgcagttgcctacaagaatatcagcaga
gcaggaagaggcaatgaatgtggatttggttggaatgacaaatctcaggcattatattgt
gacacaaacggttataaacttcaatataacaaagtccaaactgtcctctcaggtcctcgg
tcctccagagtaggagtgtacctggatcacagagcaggtattctgtctttctacagcatc
tctgaaaccatgactctcctccacagagtccagaccacattcactcagccgctctatgct
ggatttcggcttgggttctctgatggagacactgcagagttgattaaagtcaaatag
DBGET
integrated database retrieval system
