Oreochromis niloticus (Nile tilapia): 109199367
Help
Entry
109199367 CDS
T06104
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
109199367
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109199367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
U-box
zf-RING_6
zf-RING_10
zf-ANAPC11
RSS_P20
Gp58
Motif
Other DBs
NCBI-GeneID:
109199367
NCBI-ProteinID:
XP_019210239
Ensembl:
ENSONIG00000041104
LinkDB
All DBs
Position
LG3:complement(39388942..39392099)
Genome browser
AA seq
624 aa
AA seq
DB search
MICLSQLQLVRSVSEPVDYRWVKPRCAHVSELIGSIHCRNTGLDQRSSCFHQKKKKLTQS
LTLRGEMAQKGVQLDRETFSCSICLDLLKDPVTTACGHSYCMNCIKTHFDEEDSKGIHSC
PQCRKTFTPRPVLEKNTMLAALVEQLKKTGLQAAPADHCYAGPEDVACDVCTGRKLKAIK
SCLSCPASYCEKHLQPHYDAAPLKKHKLVAPSKKLQENICSRHDEVMKIFCRTDQQSICY
LCLMDEHKGHETVPAAAERTEKQKELEVRRLNIQQRIQEREKDVKLLQQEVEAINGSADK
AVEDSEKMFTELIRLIQKRSSDVKQQVRSQQETEVSRVKELQEKLEQEIAELKRKDGELE
QLSHTEDHNQFLHNYPSLSALSESTHSSSINIRPLRYFEDVTAAVSETRDKLQDILREEW
TNISLTVTEVDVLLSPPEPKTRAGFLKCSCEITLDPNTANTHLLLSEGNRKATKMKQQQS
YSDHPDRFTDWCYQVLSSESLTGCCYWEVEWRGGEVGLGVTYKNISRAGSLDECGFGYND
KSWTLYCNTNSFQFLHNDVKTVLSGPLSSRVGVYLDHRAGILSFYSISETMTLLHRVQTT
FTQPLYAGLWLWDDGATAELIKVK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgatctgtctgtcccagcttcagttggttcgctccgtctctgagcctgttgattacaga
tgggtgaaaccaagatgtgctcatgtttctgagctgataggatccattcactgcagaaac
acaggtttggaccagagatcaagctgctttcaccaaaaaaaaaagaaactcacacagtca
ctgacactgagaggagaaatggcacagaaaggagttcagctggaccgagaaaccttctct
tgttccatctgtttggatctactgaaggatccggtgactacagcctgtggacacagctac
tgcatgaactgtattaaaacccactttgatgaagaggacagtaagggaatccacagctgc
cctcagtgcaggaagactttcacaccgaggcctgtcctggagaaaaacaccatgttagca
gctttagtggagcagctgaagaagactggactccaagctgctccagctgatcactgctat
gctggacctgaagatgtggcctgtgatgtctgcactgggaggaagctgaaagccatcaag
tcctgtttatcttgtccggcctcttactgtgagaaacacctccaacctcactatgatgca
gctccattaaagaaacacaaactggtggccccctccaagaagctccaggagaacatctgc
tctcgtcatgatgaggtgatgaagattttctgtcgtactgatcagcagagtatctgttat
ctctgcttgatggatgaacataaaggccatgaaacagtcccagctgcagcagaaaggact
gagaagcagaaggagctcgaggtgagacgactaaacatccagcagagaatccaggagcga
gagaaagatgtgaagctgcttcaacaggaggtggaggccatcaatggctctgctgataaa
gcagtggaggacagtgagaagatgttcactgagctgatccgtctcatccagaaaagaagc
tctgatgtgaagcagcaggtcagatcccagcaggaaactgaagtgagtcgagtcaaagag
cttcaggagaagctggagcaggagatcgctgagctgaagaggaaagacggcgagctggag
cagctctcacacacagaggatcacaaccagtttctacacaactacccctcactgtcagca
ctcagtgagtctacacactcatccagcatcaatattcgtcctctgaggtactttgaggat
gtgacagcagctgtgtcagagaccagagataaactacaggacattctgagagaggaatgg
acaaacatctcactgacagtcactgaagtggatgttttactgtcaccaccagagccaaag
accagagctggattcttaaaatgttcatgtgaaatcacactggatccaaacacagcaaac
acacatctgttattatctgaggggaacagaaaagcaacaaaaatgaaacaacaacagtct
tattctgatcatccagacagattcactgattggtgttatcaggtcctgagtagtgagagt
ctgactggatgttgttactgggaggtggagtggagagggggagaagttggtctaggagtc
acatacaagaatatcagcagagcagggagcctcgatgaatgtggatttggatacaatgac
aaatcttggacattatattgtaatacaaacagttttcaatttttacacaatgatgttaaa
actgtcctctcaggtcctctgtcctccagagtaggagtgtacctggatcacagagcaggt
attctgtctttctacagcatctctgaaaccatgactctcctccacagagtccagaccaca
ttcactcagccgctctatgctggactttggctttgggatgatggggccactgcagagttg
attaaagtcaaataa
DBGET
integrated database retrieval system
