Oreochromis niloticus (Nile tilapia): 109203660
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Entry
109203660 CDS
T06104
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
109203660
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109203660
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
DUF1349
RSS_P20
PaRep2a
Gp58
LMBR1
Motif
Other DBs
NCBI-GeneID:
109203660
NCBI-ProteinID:
XP_019218916
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All DBs
Position
LG3:42740669..42743133
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AA seq
559 aa
AA seq
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MAQKGVQLDRETFSCSICLDLLINPVTIPCGHSYCMNCIKIHFDEEDRKGIHSCPQCRKT
FIPKPVLEKNTMLADLVEQLKKTGLQAAPADHCYAGREDVACDFCTGRKLKAIKSCLSCP
ASYCEKHLQPHYDAAPLKKHKLVAPSKKLQENICSHHDEVMKIFCRTDQQSICFVCSMDA
HKGHETVPAAAERTEKQKELKVRRLNIQQRIQEREKDVKLLQQEVEAINGSADKAVEDSE
KMFTELIRLIQKRSSDVKQQVRSQQETEVSRVKELQEKLEQEIAELKRKDGELEQLSHTE
DHNHFLHNYPSLSALSESTHSSSINIRPLSYFEDVTAAVSETRDKLQDILREEWTNISLT
VTEVDVLLSDPPEPKTRAGFLKYSREITLDPNTANTHLLLSEGNRKVTRMKQQQFYSSHT
DRFSDWCFQVLSRESLTKRCYWEVEWRGGEVCVAVAYKNVSRVGSLNECVFGFNDKSWAL
YCYSNSYQFLYNSAQTVLSGPRSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPL
YAGLYLYGDGVTSELVKVK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaaaggagttcagctggaccgagaaaccttctcttgctccatctgtttggat
ttactgataaatccggtgactattccctgtggacacagctactgcatgaactgtattaaa
atccactttgatgaagaggacaggaagggaatccacagctgccctcagtgcaggaagact
ttcataccgaagcctgtcctggagaaaaacaccatgttagcagatttagtggagcagctg
aagaagactggactccaagctgctccagctgatcactgctatgctggacgtgaagatgtg
gcctgtgatttctgcactgggaggaagctgaaagccatcaagtcctgtttatcttgtccg
gcctcttactgtgagaaacacctccaacctcactatgatgcagctccattaaagaaacac
aagctggtggccccctccaagaagctccaggagaacatctgctctcatcatgatgaggtg
atgaagattttctgtcgtactgatcagcagagtatctgttttgtctgctcaatggatgca
cataaaggccatgaaacagtcccagctgcagcagaaaggactgagaagcagaaggagctc
aaggtgagacgactaaacatccagcagagaatccaggagcgagagaaagatgtgaagctg
cttcaacaggaggtggaggccatcaatggctctgctgataaagcagtggaggacagtgag
aagatgttcactgagctgatccgtctcatccagaaaagaagctctgatgtgaagcagcag
gtcagatcccagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcgctgagctgaagaggaaagacggcgagctggagcagctctcacacacagag
gatcacaaccactttctacacaactacccctcactgtcagcactcagtgagtctacacac
tcatccagcatcaatattcgtcctctgagctactttgaggatgtgacagcagctgtgtca
gagaccagagataaactacaggacattctgagagaggaatggacaaacatctcactgaca
gtcactgaagtggatgttttactgtcagatccaccagagccaaagaccagagctggattc
ttaaaatattcacgtgaaatcacactggatccaaacacagcaaacacacatctgttatta
tctgaggggaacagaaaagtaacaagaatgaaacaacagcagttttattctagtcataca
gacagattcagtgattggtgttttcaggtcctgagtagagagagtctgactaaacgttgt
tactgggaggtggagtggagaggaggagaggtttgtgtagcagtcgcatacaagaatgtc
agcagagttgggagcctcaatgaatgtgtatttggattcaatgacaaatcttgggcatta
tattgttacagtaacagttatcagttcttgtacaacagtgcacaaactgtcctctcaggt
cctcggtcctccagagtaggagtgtacctggatcacagagcaggtattctgtctttctac
agcgtctctgaaaccatgactctcctccacagagtccagaccacattcactcagccgctc
tatgctggactatatctttatggagatggagtcacttcagaattggttaaagtgaaatag
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