Oceanobacillus oncorhynchi: NP440_12955
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Entry
NP440_12955 CDS
T08799
Symbol
rph
Name
(GenBank) ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
oon
Oceanobacillus oncorhynchi
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oon03016
]
NP440_12955 (rph)
Enzymes [BR:
oon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
NP440_12955 (rph)
Transfer RNA biogenesis [BR:
oon03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NP440_12955 (rph)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
UUI38255
LinkDB
All DBs
Position
complement(2604033..2604779)
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AA seq
248 aa
AA seq
DB search
MERQDNRKPNELRPIKITPGYITHPEGSVLIEMGQTKVICNASIEDRVPPFMRGQGKGWI
TAEYAMLPRATEQRNIRESSKGKVSGRTMEIQRLIGRALRSVVDLSKIGERTIWIDCDVI
QADGGTRTASITGAYVAMAIALHQLVEKKVLKELPLTDFLAAISVGVLPEGCEVLDLNYQ
EDSTADVDMNIVMTGKGEFVELQGTGEEATFSPKQLQAMLGLGEQGIQELISQQKETLGS
IADLVNQD
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggaaagacaggataatcgaaaaccaaatgaattgcggccgataaaaataacaccgggc
tatattacacatccggaggggtctgtattaattgaaatgggccagacaaaggttatttgt
aatgcgagtattgaagatagagtgccgccatttatgagaggccagggaaaaggatggatt
acagcggaatatgcaatgctgccgcgtgcaacagagcagcgtaatattcgtgaatcttct
aaaggaaaagtgagcggcagaacgatggagattcaacgtttgattggacgagcactacgt
tcagttgttgacctttccaaaatcggggaacggaccatctggattgattgtgatgttatt
caagcggatggcggaactagaacagcttccattacaggtgcttatgtcgctatggcaatt
gcacttcatcagcttgttgaaaagaaagtgctgaaggagcttcctttaactgatttctta
gcggcaatttcagttggtgtattgcctgagggatgtgaggtacttgatctgaattatcag
gaagacagtacagcggatgtcgatatgaatattgtgatgactggtaagggggaatttgta
gaactgcagggaactggagaagaagctacatttagtccaaagcaattacaagcgatgctc
ggtttaggtgagcaaggtattcaggaattgatcagccagcagaaagaaacgcttggctct
attgcagatttggttaaccaagactga
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