Orcinus orca (killer whale): 101278766
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Entry
101278766 CDS
T05247
Symbol
DHX58
Name
(RefSeq) ATP-dependent RNA helicase DHX58 isoform X1
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
101278766 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oor04054
]
101278766 (DHX58)
Enzymes [BR:
oor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101278766 (DHX58)
Pattern recognition receptors [BR:
oor04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
101278766 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_19
AAA_22
Motif
Other DBs
NCBI-GeneID:
101278766
NCBI-ProteinID:
XP_004282853
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All DBs
Position
19:41005320..41014952
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AA seq
680 aa
AA seq
DB search
MELRPYQWEVIMPALEGKNIIIWLPTGSGKTRAAAYLAKRHLETVDGAKVVVLVNRVHLV
TQHCEEFSRMLGERWTITTLSGDMGPRAGFGHVAQRHDLLICTAELLQKALTSLEEGEHV
ELNAFSLLVVDECHHTHKDTVYNVILSRYLELKLRRTRPLPQVLGLTASPGTGGASTLNG
AIDHVLQLCANLDTWRIMSSRDYRSQLQHSRQPCKQYDLCHRRTQDPFGDMLKELMDQIH
DHLEMPELRRDFGTQTYEQQVVELSRDAAEAGLQERRVYALHLRRYNDALLIHDTVRAVD
ALATLQDFYDRERTTKTQILRAERWLLALFDDHKNKLAHLATRGPENPKLEVLEEILQKQ
FRSPDSPQGIIFTRTRQSAHSLLLWLQQQPGLQTVAIRPQLLIGAGNSSQSAQMIPMTQR
DQQEVIQKFRTGTLNLLVATSVAEEGLDIPQCKVVVRYGLLTNEISMVQARGRARASQSV
YSFVAAQGSRELKRELTNEALETLMERAVAAVQEMDRAKYQDKIQALQRAALVKRAAQAA
QRESHQRKFLAEHVRLLCVNCTVPVGYGSDLRRVEGTHHVNVNPNFLIYYNISQEPVVIN
RVFKDWRPGGVISCRNCGEGWGLQMIYKSVKLPVLKVRSLLLETPQGRVQSKKWSRVPFT
VPDFDYVQHCAQSLADFSLD
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgaccctaccagtgggaggtgatcatgcctgccctggagggcaagaatatc
atcatttggctgcccacgggctccgggaagaccagggcagctgcttatttggccaagagg
catctagagactgtagacggagccaaggtggttgtgttggtcaacagggtgcacctggtg
acccagcattgtgaggagttcagccgcatgctgggcgaacgctggaccattacaaccctg
agtggggacatggggccacgagctggctttggccacgtggcccagaggcacgacctgctc
atctgcacagctgagctgctgcagaaggcactgaccagcctggaggagggggagcatgtg
gagctcaacgccttctccctgctggtggtggatgagtgtcaccacactcacaaagacacc
gtctacaacgtcatcctgagccggtacctggagcttaaactccggaggacccggccgctg
ccgcaggtgctgggtctcacagcctcgccaggcactggcggggcctccacgctcaatggg
gccattgaccacgtcctgcagctctgtgccaacctggacacgtggcgcatcatgtcatcc
cgggactaccgctcccagctgcagcacagccgccagccctgcaaacagtacgacctctgc
cacagacgcacccaggatccgtttggcgacatgctgaaggagctcatggaccaaatccac
gaccatctggagatgcccgagttgagacgggacttcgggacgcagacctacgagcaacaa
gtggtggagctgagccgggatgcggctgaggcggggctccaggagcggcgggtgtacgcg
cttcacctgcgtcgctacaacgacgcactgctcatccacgacacggtccgtgcggtggat
gccctggccactctgcaggatttctacgacagggagcgcaccactaagacgcagatcctg
cgtgccgagcgctggctgctggcgctgtttgatgaccacaagaataagctggcccacctg
gcaactcgtggcccagagaacccgaaactggaggtgctggaagagatcctgcagaagcag
ttcaggagccctgacagcccccagggcatcatcttcacccggacccgccagagtgctcac
tccctcctgctctggctccagcagcagccaggcctgcagacagtggccatcaggccccag
ctgttgattggggctgggaacagcagccagagcgctcagatgatcccgatgacccagagg
gaccagcaggaagtgatccagaagttccggactggtaccctgaacctcctggtggctacg
agtgtggcagaggaggggctggacatcccccagtgcaaggtggtggtgcgctatgggctc
ctgaccaatgagatctccatggtccaggcaaggggccgtgcccgggccagccaaagtgta
tactcatttgtggcggcccaaggtagtcgggagctgaagcgggagctgaccaatgaggcg
ctagagacgctgatggaacgggcagtagctgctgtgcaggagatggaccgggccaagtac
caggacaagatccaggctctgcagcgggcagccttggtcaagcgggcagcccaggcggcc
cagcgggagagtcaccagcgcaagttcctggcagagcacgtgcggctcctctgtgtcaac
tgcacggtgcccgtgggctatgggagtgacctacggagggtggagggtacccaccacgtc
aatgtgaaccccaacttcttgatctactacaacatctcccaggagcctgtggtcatcaac
agagtcttcaaggactggaggcctggaggtgtcattagctgcaggaactgtggggagggc
tggggtctgcaaatgatctacaagtcagtgaagctgccagtactcaaagtccgtagcttg
ctgctggagacaccgcaagggcgggtccagtccaagaagtggtcccgcgtgcccttcacc
gtgcctgactttgactacgtgcagcactgtgcccagagcctggcagacttctccctggac
tga
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