Orcinus orca (killer whale): 101281154
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Entry
101281154 CDS
T05247
Symbol
TRIM35
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM35
KO
K12012
tripartite motif-containing protein 35
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oor04121
]
101281154 (TRIM35)
Ubiquitin system [BR:
oor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101281154 (TRIM35)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-B_box
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-RING_5
zf-RING_6
zf-RING_10
Baculo_IE-1
Prok-RING_4
SpoIIE
Motif
Other DBs
NCBI-GeneID:
101281154
NCBI-ProteinID:
XP_004270737
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All DBs
Position
6:16216476..16240361
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AA seq
493 aa
AA seq
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MEAGPALSPGPSRSFKEELLCAVCYDPFRDAVTLRCGHNFCRGCVTRCWEVQVAPTCPVC
KDRAAPADLRTNHTLNNLVEKLLREEAEGARWTGHRSPRLCRLHRGQFNLFCLDDKELLC
CSCQTDPRHQGHRVQPVKDTAHDFRAKCRNMEHALREKAKAFWAMRRSYEAIAKHNQVEA
SWLEGRIRQEFDKLREFLRVEEQAILDAMAEEARQKQLLAEEKMKRLAEDTEALAHEIER
LQMEMKEDDVSFLMKHKSRKRRLFCTMEPEPVQPGMLIDVCKYLDSLQYRVWRKMLVCVE
SVPFSFDPNTAAGWLSVSDDLTSVTNHGYRVQVENPERFSSAPCLLGSCVLSQGSHAWEV
DLGALPSWRVGVVRMRQDAGAEGHSHSCYHDTRSGFWYVCRTQGVDGDHCVTSDPATSPL
VPAIPRRLRVELECEEGELSFYDAERHCHLYTFHARFGEVRPYFYLGGSRGDGPPEPLRI
CPLRITVKEELDG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggggcccgccttgtcccccgggccttcccgctccttcaaggaggagctgctc
tgcgccgtctgctacgaccccttccgtgacgccgtgactctgcgctgcggccacaacttc
tgccgcgggtgcgtgacccgctgctgggaggtgcaggtggcacccacctgcccggtgtgc
aaggaccgcgcggcccccgccgacctgcgcaccaaccacaccctcaataacctcgtggag
aagctgctgcgcgaggaggccgagggcgcgcgctggaccggccaccgctctccgcgcctc
tgccgccttcaccgcggccagttcaacctcttctgtcttgacgacaaggagctgctgtgc
tgctcgtgccagaccgacccccggcaccaggggcaccgcgtgcagccggtgaaggacact
gcccacgactttcgggccaagtgcaggaacatggaacacgcgctgcgggagaaagccaag
gccttctgggccatgcggcgctcctacgaggccatcgccaagcacaatcaggtggaggct
tcctggctggaagggcgaatccggcaggagtttgacaagcttcgagagttcttgagagtg
gaggagcaggccatcctggatgccatggccgaggaggccaggcagaagcagcttctggcc
gaggagaagatgaagcggctggcggaagacacggaggccctggcccatgagattgagcgg
ctgcagatggagatgaaggaggatgacgtttcctttctcatgaaacacaagagccgaaaa
cgccgcctcttctgcacgatggagccagagcctgtccagcctggtatgctcatcgacgtt
tgcaagtacctggactccctgcagtaccgagtctggaggaagatgctcgtgtgtgtcgaa
tctgtgcctttcagctttgatcccaacactgcggctggctggctgtccgtgtcagacgac
ctcaccagtgtcaccaaccacggctaccgggtccaggtcgagaatccggagcgcttctca
tcagcaccctgcctgctgggctcctgcgtcttgtcgcagggctcgcatgcctgggaggtg
gacctgggggcactgccgagctggcgcgtgggcgtggtgcggatgcgccaggacgcgggc
gccgagggccactcgcacagctgctaccacgacacgcgctcgggcttctggtacgtgtgc
cgcacacagggcgtggacggcgaccactgcgtgacctcggaccccgccacatcgcccctg
gtccccgccatcccgcgccgcctgcgcgtggagttggagtgcgaggagggtgagctgtcc
ttctacgacgcggagcgccactgccacctgtacaccttccacgcccgcttcggggaggta
cggccctacttctacctgggcggctcgcggggggacgggccccccgagccgctgcgcatc
tgccccctgcgcatcaccgtcaaggaggagctggatggctga
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