Orcinus orca (killer whale): 101285258
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Entry
101285258 CDS
T05247
Symbol
POM121C
Name
(RefSeq) nuclear envelope pore membrane protein POM 121C isoform X1
KO
K14316
nuclear pore complex protein Nup121
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03013
Nucleocytoplasmic transport
oor05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101285258 (POM121C)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101285258 (POM121C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101285258 (POM121C)
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101285258 (POM121C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
101285258
NCBI-ProteinID:
XP_004268853
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All DBs
Position
16:complement(78941411..78989135)
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AA seq
1218 aa
AA seq
DB search
MSPAASAAGGGDRRRPLASVRDGRGRGWGCGGPAGAALLVLSLLGLVLYLVPAAAALAWL
AVGATAAWWGLSREPRGSRAFSLVRNARRQRTLLASPPAKSAVNGNLLEPRSLLEGPDPA
ELLLLGSYLGKPGPPQPAPAPESRDLRERPGRRPPARTAPPAQSAHPRGVQVHSFLPTPL
LRSSRRPSHRDCGTLSHRFVITPRRRYPIQQTQYSLLGVLPTVCWNGYHKKTVLSARNSK
MVCSPVTVRIAPPDSKLTRSPIREQIINSTLSSPSTSAPDPCAKETVLNALKERKKRTVE
EEDQIFADGQENKRRRHDSSGSGHSAFEPLVANGVPASFVPKPGSLKRGLNSQSSDDHSN
KRSRTSSMSSLTSTYTGGIPSSSRNAIASSYSSTRGLSQLWKRSGPGSSPFSSPASSRSQ
TPERPAKKIREEELSHHSSSSTPLVTDKESQGEKVADKTTCKKQNSWNSPSTPGSSGRRK
RKVQLLPSRRGDQLTLPPPPQLGYSITAEDLDLEKKASLQWFNKVLEDKTDAASNSVTEN
PPTSQSSFTFTLPAAGIASSPASLPAPSTNPLLESLKKMQNSPGLPSLPESAGVATTVAH
SPPKTPSPLAPLGSSESAPLPGTSEDSKSTTTFLGLTPASSPGPVTDAKSPPDPQAETPA
KSQAPSAPSPSPKQSILFGMLSTPPVNPPASAAPAVSSASPMFKPIFVVPPKSENEGPLP
SSPSKVTAASSSSSAVPMTTSSPPLTFKPIFSNMGPPASVPMLTPFSLKQTATPATTTSA
PLFSGQAGATSAVVSMTTASASADSAPKPAFSFGVRTATSTPSSVTSTTASASQPFLFGT
PPASGASFTPAVGPIFQFGKPPAMPASTAVATFGQSLPSAAQTAPSSSSSSSSTASFSGF
GSTLTASAPVSSSQPTLTFSSTTAPAFNIPFGPSAKPPPPSYPGANPQPAFGAADGQQQG
AAKSTPVPSFGSSFTFGNSAAPAPTAAPAPAPAQPAFGGTAQSAFSGLKATASAFGTPAS
TQPAFGGTTAAFSFGAATTSGFGATTQTASSGTSSSVFGSTTPSPFTFGGPAAPAGGGGF
GISAATPGTSSASGAFGFGAGQSGTTGSTTPFGGGLSQNSLGAPSQGTPFAFNVASTPDS
KPVFGGTSTPAFGQNTPAPGVGASGSSLSFGASSTPAQGFVGVGPFGSAAPSFSIGAGSK
TPGARQRLQARRQHTRKK
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgtctccggcggcttcggcggctggaggaggcgaccgacggcggccgttagcgagtgtc
agggacggccggggccggggctggggctgcggcgggccggctggggcggcacttctcgtc
ctgtcgctgctcggcctcgtgctgtacctggtgccggcggcggctgcgctggcctggctg
gctgtgggggctaccgcggcctggtggggactgagccgcgagccccggggttcgcgcgcc
ttctcgctggttcggaacgccaggcgtcagcgaacactgctcgcctcgcctccggccaag
tcggcagtaaacggaaatcttctagagccgcggagcctgctggaaggaccagaccccgct
gaactgctcctcttgggcagttacctgggcaagccaggccccccgcagcctgcccccgcc
ccggagagcagggacctgcgggagaggccgggccgacgcccacccgcccgcaccgcgccg
cccgctcagtcggcgcatccccgtggcgttcaagttcactccttcctccccactcctctc
ctccggtcctctaggaggccttcccaccgggattgtgggactttatcacatcggtttgta
ataacacctcgaagaagatatccaattcaacagacccagtattccttgctgggggtactt
cccacagtatgctggaatggttatcacaagaagactgtgctatctgctcgtaattccaaa
atggtgtgcagcccagtgacagtgaggattgctcctccagatagcaaattgactcgttct
ccgatacgagagcaaattatcaactcaacactgtcctcaccatcaactagtgccccagac
ccatgtgcaaaggagacagtactgaatgccctcaaagagaggaagaaaaggacagtggag
gaggaagaccaaatatttgctgatggccaggaaaataaaagaaggcgccatgatagcagt
gggagcggacattcagcatttgagcccctggtggccaacggagtccctgcttcttttgtg
cctaagcctgggtctctgaagagaggtctcaattcccagagctcagatgatcactcgaat
aagagatcccgcacctcttctatgagctccttgacaagcacatacacaggtggcatccct
agctccagccgcaatgccattgccagttcttacagttctactcgaggtctctctcagctg
tggaagaggagtggacccggttcatctcccttctctagcccagcctcatcccgctcccag
acaccagagcggccagcaaagaaaataagagaagaggagctttctcatcattctagttct
tcaactccattggtaacagacaaggagtcccagggagaaaaggttgcagataaaaccaca
tgtaagaaacagaactcgtggaattccccatcaacacctggcagctctgggcggcgtaaa
cggaaggttcagttgctgccctccaggcgaggggaccagctgaccttgcctccacctccc
cagcttggttattcaatcactgctgaagacttagacttggaaaagaaagcttctttacag
tggtttaacaaggtcttggaggataagactgatgctgcctcaaactctgtcactgagaac
ccacctaccagtcagtcttctttcacttttaccctgcctgctgctgggattgcttcatcc
ccagcctccctcccagccccaagcactaacccactgttggagagcttgaagaagatgcag
aattccccaggcctaccatccctccccgaatctgctggcgtggcaaccactgtggcccat
tcgcctccgaagacacccagccctctggcccctctgggctcttcagagtcagcacccctt
ccaggcacctccgaagactccaaatccaccaccactttcttggggctgacccctgcttct
tccccaggaccagtcactgacgccaagtcacctccggaccctcaggctgagacacctgcc
aaatcccaagccccgtccgccccgtctcccagccccaagcagagtattctgtttggaatg
ctgagcaccccacctgttaaccctcctgcctctgcggcccctgctgtgtcttcagcatct
cccatgttcaagcccatttttgtggtcccacctaaaagcgagaatgagggccctttgccc
tctagcccttccaaggtcacagccgcgtcatcttccagctcagccgtccccatgacgact
agcagcccacccctcactttcaagcctatctttagcaacatggggccacctgcatctgtg
cccatgttaactcccttctccctcaagcaaacagctactccagccactaccacgagcgcc
cctctcttcagcggccaggctggcgccacctctgcagtggtgtccatgaccacagccagc
gcctccgcagactctgctccgaagcccgcgttcagcttcggtgtgcgcaccgcgaccagc
accccgagcagcgtgactagcaccaccgcttccgcctcccagcccttcctctttgggact
ccccctgcttccggtgccagcttcaccccagccgtgggccccatattccaatttggcaag
cctcccgccatgcccgcttcaacagcagtcgccacctttggccagtcccttcccagtgcc
gcccagaccgcccccagcagcagcagcagcagcagcagcacagccagctttagtggcttt
ggcagcaccctcaccgcctcagccccagtcagcagcagccagcccacgctgacgttcagt
agcaccaccgccccagcgttcaacattcccttcggcccgagcgccaagccacctcccccg
tcctacccaggagccaacccccagcccgccttcggggctgcggatgggcagcagcagggg
gctgccaagtcgacccccgtccccagcttcggcagctctttcactttcggaaactctgca
gccccggccccgactgcggctccagcgccagccccggcccagccagcctttggtggcact
gcgcagtcggccttcagcggtctgaaggccacggcctctgcctttggcacccctgccagc
acccagccagcctttggcggcaccacagctgccttctccttcggtgcagccaccacctct
ggctttggagctacaacccagaccgccagcagtgggaccagtagctcagtgttcggcagc
acaacaccatcgcccttcacatttgggggaccggcagccccagccggcggtgggggcttt
gggatcagtgcggccaccccaggcaccagctctgcctctggagcgttcggctttggagca
ggacagagtgggaccactggcagcacgacccctttcgggggaggcttgagtcagaacagc
ttgggcgcgcccagccagggcacaccctttgccttcaacgtggccagcacgccggacagc
aaacctgtgtttggaggcacctccacacccgcctttggtcagaacacccctgctcctggg
gtgggcgcatcaggcagcagcctctcctttggggcatcctcaacacccgcccaaggcttt
gtcggagttggacctttcggatcggcggccccctccttttccattggtgcgggatccaag
accccaggggctcgacagcgactgcaggcccgaaggcagcacacccgcaagaaatag
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