Orcinus orca (killer whale): 101287039
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Entry
101287039 CDS
T05247
Name
(RefSeq) LOW QUALITY PROTEIN: POM121-like protein 2
KO
K14316
nuclear pore complex protein Nup121
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03013
Nucleocytoplasmic transport
oor05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101287039
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101287039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101287039
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101287039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
101287039
NCBI-ProteinID:
XP_012394658
LinkDB
All DBs
Position
10:84622323..84625376
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AA seq
1017 aa
AA seq
DB search
MGTYVGKLGLWPSSPAGGRTDLSERPLNRRPAQPLHQVPRVQHVHRAHPAPRHRPARSLP
NWDPTSPDACVVNEAWRPFPMNRSRNSIMGPLPSDWWESYFKGSIWSLRHPRATRSPVTR
SLAPREQTAAPSTAPAEVMNSAGVSPSEKXPDPCAKETVLRGLRKCKKGKVRWQEPLVPE
SLDSKSIPETRPSAFKPLTKNGVLTSFVPRPGPLKRSLDCWGSDHSLNNRPSCSSMDSLA
STHTGGPLSSQRNAITSSYSSSRDFSEPWKSIPSTXLQVPEWPMKRKEHWHPSHSPAPLV
SDESPETSGSSGQQNQVPLLLSSPRSLLSLTLPPQLGYAVPEDLALGKKAGLQRSNKARE
DTTEVTTDSVPDTWSAIQPPLSQGTDPQLESLHKMQESPSPLAFPQPTGEAISVAHSPLK
TASLLASHVCSQSEPLSGTSSDSKPTTTFILLTLVSPTAPVTETTWPLSLSSCRTPRLPC
HYPAAPTMQSTLFGLMSSPAPHLPASAPPVATSADRMSKPILGLPANSETGGSSYSRISS
TAAASSPPGISSPTFKPIFGSIRPLKTMPVRAPFSFKQTTPPPTPASTRLFHGLVKATSV
VMSTTPASTSKGSFKPPLEFGVVNVTSTMGRTCSSPSTCPPFPLRAACAFRASFSPDAGF
TFPLCQRPTIPTVHTVTVFSQVLPSAVQISPTRSTADFSAVGGPPAASALVTTSQPALSS
RISSSKSAFTIPLESSSRPPSPLTLGATPQPAFGAAYVQKQEAPQPALGPSFCSSPIFGN
STVASSTPTPTPAQPSFSGTTQSTSGGLAPPASTFHIPASFRPAFDSTPVGSLLXSNTNG
LGVVTPSHQTGACGSVFGSTSPRPFDFGGLVSPVDCEETGLSVTAPDASSSSGALSPGAV
PSGSTNAITPLGKGWGPGSQGWTSQGTPLALGKASISARETMFGDTSMAPFAQSTPVTGS
VKAGSSLGFGMPSPLPQGSVGRRSFRPSAPSFSIGEKSKTPQNREQGHSRRHHAHKK
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgggcacttacgtgggcaagctgggactctggccgtcatccccagcaggggggcgcaca
gacttgtcggagaggcccttgaaccgccggccagctcagccccttcatcaggtcccccgg
gttcagcacgtccatcgtgcccaccctgcccctcggcacagacctgcgaggagcctgccg
aactgggatcctaccagtcccgacgcgtgcgtggtcaatgaggcttggaggccctttccc
atgaacaggtcccggaattccatcatggggcctcttccctcagactggtgggaaagttac
ttcaaggggagtatctggtctcttcggcaccccagggcaacaaggagcccggtgaccagg
agcctcgctcctcgtgagcagacagcggccccctccactgccccagcagaggtaatgaac
tctgcaggggtctcaccttctgagaagnccccagacccatgtgcgaaggagacagtgctg
aggggcctcagaaagtgcaagaaggggaaagtgagatggcaagaaccacttgttccagag
agcttggacagtaagagcattccagagaccagaccatctgcgtttaagcctctgacgaaa
aatggagtcctcacttcttttgtgccgaggcctgggcctctgaagagaagcctcgactgc
tggggctcagatcacagcttgaataacaggcccagctgctcctccatggactccttggcc
agcacacacacaggtggcccccttagctcccaaagaaatgctattacaagctcttacagc
tcttctagagatttctctgagccttggaagagtattcccagtacataactccaggtacca
gagtggccaatgaaaaggaaagaacattggcatccgtctcactctccagccccactggta
tcagatgagtccccagaaacatctggcagctctgggcagcaaaatcaggttcccctgctt
ctgtcaagccccaggagcctgctgtccctgactctgcctcctcagctcggttatgcggtc
cccgaagacctggccttagggaaaaaagctggactccaacggagcaacaaagccagagaa
gatacgactgaggtcaccacagactctgtccctgacacttggtctgctattcagcctccc
ctgtcccagggcactgatcctcagctggaaagcttacataaaatgcaggagtctccaagt
ccactggccttcccacaacctaccggagaggcaatcagtgtggcccactcgcctctgaag
acagcgagcctgctggcctcacatgtgtgctcccagtcagagcccctttcaggcacctct
tcagactcaaaacccaccactactttcatccttctgacccttgtttctcccacagcacca
gtcactgagaccacgtggccacttagcctctcaagctgccgtaccccgagactcccctgc
cattaccctgcagcacccaccatgcaaagcactttgtttggattgatgagcagcccagcc
ccccatcttcctgcatctgcacctcctgttgcaacttctgctgaccgcatgtcaaaaccc
atcttggggctcccagccaatagtgagacaggaggctcctcatattccagaatttcaagc
acagctgcagcatcttcacctccaggtatctcaagtcccaccttcaagcctatctttggc
agcataagaccacttaaaactatgcccgtgagagctcctttctctttcaagcagaccact
cctccacctactcctgcttctacccgtctcttccatggcctggtcaaggctacctctgta
gtcatgtccaccaccccagccagcacatccaaaggctcctttaagccgcctttggaattt
ggtgtagtgaatgttaccagtaccatgggccgcacttgctccagcccttccacttgcccc
cctttccctctcagggctgcctgtgctttcagggccagcttctccccagatgcaggcttc
actttcccactgtgccagcgtccaaccattcctactgtgcacacagtcaccgtctttagc
caggttcttcccagtgctgtccagatatcccctaccaggagcactgccgattttagcgct
gtgggtggccctccggcagcttcagccctagtaaccaccagccagcctgcattgtcatcc
aggatctccagttcgaagtcagcattcacaattcccttggagtcaagctcaaggccacct
tccccactaaccctgggagccactccccaacctgcatttggggctgcatatgtgcagaag
caagaagccccccaaccagcccttggcccaagcttctgtagctctcccatttttggaaac
tcaacagtggcctcctcaaccccaacaccgaccccagcccagccatccttcagcggtacc
acgcagtcaacctctgggggtttggcaccaccagcctccacctttcacatccctgccagc
ttccggccggcctttgacagcactccagtaggttcccttttgnngtctaatacgaatggt
ttgggagttgtcaccccaagccatcagactggggcttgtggctcagtgtttggcagcaca
tccccacgaccatttgactttgggggattagtgagccccgtggactgtgaggagactggg
ctcagcgtcactgccccagacgcgagctccagctccggagcactcagccctggagcagtg
ccgagtgggagcactaacgccatcacacccttggggaaaggctggggcccaggcagccag
ggctggaccagccagggcacacctttggccctggggaaggccagcatttctgcaagagaa
actatgtttggggacacatccatggccccctttgctcagagcacccctgtcactggatca
gttaaggcaggcagcagccttggctttgggatgccctctccactgccccaggggtctgtt
gggagaagatctttcagaccgtcagccccttcgttttccattggtgaaaaatcaaaaacc
ccacagaatagggagcaagggcattcccgaaggcatcatgcccacaagaaataa
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