Orcinus orca (killer whale): 117198890
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Entry
117198890 CDS
T05247
Symbol
GTF2H4
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03022
Basal transcription factors
oor03420
Nucleotide excision repair
oor05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117198890 (GTF2H4)
09124 Replication and repair
03420 Nucleotide excision repair
117198890 (GTF2H4)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
117198890 (GTF2H4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oor03021
]
117198890 (GTF2H4)
03400 DNA repair and recombination proteins [BR:
oor03400
]
117198890 (GTF2H4)
Transcription machinery [BR:
oor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117198890 (GTF2H4)
DNA repair and recombination proteins [BR:
oor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117198890 (GTF2H4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
117198890
NCBI-ProteinID:
XP_033272989
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All DBs
Position
10:complement(83099839..83105387)
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AA seq
463 aa
AA seq
DB search
MESTPSRGGLSRVHLQCRNLQEFLGSLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRM
LFLEQPLPQAAVALWVKKEFSKAQEESTGLLSGLRIWHIQLLPGGLQGLILNPIFRQNLR
IALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLL
SQAGLMKSAEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQ
LSFSTLGKDYSVEGMSDSLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGVSGAGG
TAHHPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGI
TAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFE
LLLAHARELGVLVFENSAKRLMVVTPAGHGDVKRFWKRQKHSS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaccccttccaggggtggactgagtcgagtacacctacaatgcaggaacctg
caggaattcctagggagcctgagccctggggtattggaccgattgtatgggcaccctgcc
acctgtctggctgtcttcagggagctcccatctttggctaagaactgggtgatgcggatg
ctctttctggagcagcctttgccgcaagctgctgtagccctgtgggtgaagaaggaattc
agcaaagctcaggaggaaagcacggggctgctgagcggcctccgtatctggcacatccag
ctgctccctggtgggctccagggcctcatcctcaaccccatattccgccaaaacctccgc
atcgcccttctgggtgggggcaaggcctggtctgatgacacaagtcagctgggaccagac
aagcacgcccgggatgtcccctcacttgacaagtatgccgaggagcgatgggaggtggtc
ctgcacttcatggtgggatcccccagcgcagccgtcagccaggacttggctcagctcctt
agccaggctgggctcatgaagagtgctgaacctggagagccgccctgcattacctctgcc
ggcttccagttcctgttgctggacaccccggcccagctctggtactttatgttacagtat
ctgcagacagcacagagtcggggcatggacctagtggagattctctcctttctcttccag
ctcagcttctctactctgggcaaggattactctgtggaaggtatgagtgattctctgttg
aacttcctgcaacatctgcgtgagtttgggcttgttttccagaggaagaggaaatctcgg
cgttactaccccacgcgactggccatcaatctctcgtcaggtgtttctggggctgggggc
actgcacatcatcctgggttcattgtcgtggaaaccaattaccggctgtatgcctacacg
gagtcggagctgcagatcgccctcattgcccttttctctgagatgctctatcgcttcccc
aacatggtggtggcacaggtgacccgggagagtgtgcagcaggccattgctagtggcatc
acagcccaacagatcatccatttcctaaggacaagggcccacccagtgatgcttaaacag
acacctgtgctgccccccaccatcacggaccagattcggctgtgggagctggaaagggac
agactccggttcaccgaaggcgtcctgtataaccagttcctgtcgcaagtggactttgag
ctgctgctggcccacgctcgggagctgggcgtcctggtgttcgagaactcggccaagcgg
ctcatggtggtgaccccggccgggcacggcgacgtcaagcgcttctggaagcggcagaag
cacagctcctga
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