Ogataea parapolymorpha: HPODL_04659
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Entry
HPODL_04659 CDS
T08137
Name
(RefSeq) ATP-dependent RNA helicase DBP10
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
opa03009
]
HPODL_04659
Enzymes [BR:
opa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HPODL_04659
Ribosome biogenesis [BR:
opa03009
]
Eukaryotic type
Pre-60S particles
Helicases
HPODL_04659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
25774086
NCBI-ProteinID:
XP_013936477
UniProt:
W1QL37
LinkDB
All DBs
Position
II:complement(233455..236232)
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AA seq
925 aa
AA seq
DB search
MSDEEFDIASNIVADGVDSDSDRQDSDAEVQDEIVTSDEESSDEEPAAKRPKVDPSKFPS
LELSDDDEQETTNYFLNQPLAKKAKSGTFASFGLAKYILANLSKKGYKQPTPIQRKTIPL
IMSNRDVVGMARTGSGKTAAFLLPLIEKLKTHVAKIGVRAIVLSPSRELAMQTSKQFKEF
SRGSDLRSLLLIGGDSMEDQFGAMMANPDVIIATPGRFLHLKTEMQLDLRTVEYIVYDEA
DRLFEMGFAEQLNELLAALPEKRQSMLFSATLPRNLVDFAKAGLTNPVLVRLDSETKISD
ELQMCFISTKKNEREANLLLLLQEVIKMPVATPEELRRLDAANRLDDEDDEDEEEGKKKQ
KKRPRREKLPRAGELPTKHSTIVFVPTKHHVEYVTLLLKDAGYATAYIYGSLDQHARRRQ
LLNFRAGLCPILVVTDVAARGIDIPVLANVINYSFPSSSKIFVHRVGRTARAGNSGWAYS
IVGEAELPYLLDLEVFLGRKVLLTSMHEKKVQLLKDKYLEQHGSMAGFQEPKLSYTERLV
LGSAPRKLIGELQELYETIMKHNYDIRSLKAVADKGEQLYFRTRSGASVESLRRAKEIVN
LGWDAQNLLFGKNEELEKEQFLAKLQNRKNKETVFEFGKRDDSLVDLMNTRRRQIASVQR
KAQERRELLELERVSGLTHTLEDELFKDERGVEVGYNVNEEELRRTFEDGDVVLESKKPK
KKSFKDPNYYISHYAPASAIQEQQLSLDSGFTAEANRAAFDIDAEDEKVAVQRQTARVLW
DKKAGKYKKVQDDKKYIIGESGQKIPASYRSGKFDEWKAQHNINFKTGAAEQNRGFDVGL
SGKRQRGRFVHTKQDAPKLPDKNRDNYKEQVEKVKKAVESGRHVKGWNTNKGRDELRSVE
QIRKTREVKEKRRAKNARPSRKKKK
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgaggagtttgatattgcaagcaatattgtggcagacggcgttgacagcgac
tctgaccgccaggacagtgatgctgaagttcaggatgagattgtgactagcgatgaggag
agctctgacgaggaaccggctgcaaaaaggccaaaagtcgatccgtccaagtttcctagt
ttggagctgtctgatgacgacgagcaggaaacgacaaactattttttgaaccagccgctc
gccaagaaggccaagagtggtacttttgcttcgttcggcctcgcgaagtacattctcgca
aacctgagcaagaaagggtacaagcagcccacccctattcagagaaaaactatccccctg
attatgtccaacagagacgtggttggaatggctcgaacgggatctggtaagactgcagca
tttttgctgccgctgatcgagaaactgaagacgcacgtggccaagatcggtgtcagggcg
attgttttgtcgccgtcgcgagagctggctatgcagacctccaagcagttcaaggagttc
agtcgcgggtcagatctgcggtcgctgctgctgattggtggagactcgatggaggaccag
tttggcgccatgatggccaaccctgacgtgattattgccacgcccggccggttcttgcac
ctcaagacagaaatgcagcttgacctgcgcacggtggagtacattgtgtacgacgaggca
gatcggctgtttgaaatgggttttgccgagcagctgaacgagctgctggcggcgctgccc
gagaaaagacagtcgatgctgttttcggccacgctgccacgcaaccttgtggactttgcc
aaagccgggctgacgaacccggtgctggtgcggctggactccgagacaaagatctcggac
gagctacagatgtgcttcatcagcacgaagaaaaacgagcgcgaggcgaacctgctgctg
cttttgcaggaggtgattaagatgccggtggccacgccggaggagctcagacggctggac
gcggcgaaccggctggacgacgaagacgatgaggacgaagaggaaggcaagaagaaacag
aagaaacggcccagacgcgagaaactgccgcgcgcgggcgagctgccgacaaaacactcg
acgatcgtgttcgtgccgaccaagcatcacgtggagtatgtcacgttactgctcaaggac
gccgggtatgccaccgcgtacatctatggatcgctggaccagcacgcgcggcgcagacag
ctgctgaatttccgtgctggactgtgtccgatccttgtggtgaccgacgtggctgcgaga
ggaatagatattccggttctggcaaacgtgataaactactcgtttccgtcgtcgtccaag
atatttgtgcaccgtgtgggacggacagcgagagcgggcaacagcggatgggcgtactct
attgtgggcgaggcagagctgccgtatttgctggatttggaggttttccttgggcgcaag
gtgcttttgacgtcgatgcacgagaaaaaagtgcagctgctcaaagacaagtatttggaa
cagcacggaagcatggcgggcttccaggagccgaagctctcgtacacggagcggctggtg
ttgggaagtgcgccgcggaagctgattggcgagctgcaggagctgtacgagacgatcatg
aagcacaactacgatatccggtctttgaaggcggttgccgacaagggagaacagctgtat
ttccggacacggagcggagccagtgttgagtcgcttcgtcgggcaaaggagattgtgaac
cttggctgggacgcgcagaatttattgtttggcaagaacgaagagctggaaaaagagcag
tttttagctaaattgcagaaccggaaaaacaaagagaccgttttcgagtttggcaagcgc
gacgactcgctcgtggacctcatgaacacgagacggcgccagatcgcgtctgtacagcgc
aaggcccaggaaagacgtgagctgctggagctggaacgtgtttctggcctgacgcacact
ctggaggacgagctattcaaggacgagcgaggagtcgaggtcgggtacaacgtgaacgag
gaggagctgcggcgaacgtttgaggacggcgacgttgtgctggagtcgaaaaagccgaag
aagaagtcgttcaaagacccaaactattatatctcgcactatgctccggcgtcggcgatc
caggagcagcagctctcgctggattctgggttcacggcagaggcgaatcgggcagcgttc
gatatcgacgccgaggacgagaaggtggctgtgcagcgccagacggcacgggtgctctgg
gacaagaaggcgggcaagtacaaaaaagtgcaggacgacaaaaaatacatcattggcgag
tcgggccagaaaatccctgcgtcataccggtcgggcaagtttgacgagtggaaggcgcag
cacaacatcaactttaagacgggcgcggccgagcagaacaggggctttgacgtcggcttg
tctggcaaaagacaacggggccgttttgtgcacacgaagcaggacgctcctaaactgccg
gataaaaatagagacaactacaaagagcaggtggagaaggttaagaaggcggtggagtct
ggacgccatgtcaagggctggaacactaataagggccgtgacgagctgcgctctgtggag
cagatcaggaagaccagagaggtgaaggagaagagacgggccaaaaatgcccgcccgagc
cgcaagaagaagaaatag
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