Ochotona princeps (American pika): 101517875
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Entry
101517875 CDS
T07609
Symbol
SEC61A2
Name
(RefSeq) protein transport protein Sec61 subunit alpha isoform X1
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03060
Protein export
opi04141
Protein processing in endoplasmic reticulum
opi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
101517875 (SEC61A2)
04141 Protein processing in endoplasmic reticulum
101517875 (SEC61A2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101517875 (SEC61A2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101517875 (SEC61A2)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
opi02044
]
101517875 (SEC61A2)
Membrane trafficking [BR:
opi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
101517875 (SEC61A2)
Secretion system [BR:
opi02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
101517875 (SEC61A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Plug_translocon
Motif
Other DBs
NCBI-GeneID:
101517875
NCBI-ProteinID:
XP_004578520
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Position
16:complement(58041896..58072907)
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AA seq
476 aa
AA seq
DB search
MGIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG
MIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS
LFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLP
NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN
LYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVH
VVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPTA
AAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEVGGMGALFF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcaaatttttagaagttatcaaacccttctgtgcagttctacctgaaattcag
aaacctgaaaggaaaatccagtttagagaaaaggtactatggactgctataactctgttc
attttcttagtgtgttgtcagatcccactgtttggaatcatgtcatcagattctgcagat
cctttctactggatgagagttattcttgcatctaacagaggaactttaatggaactggga
atctccccaattgtaacatctggtttgatcatgcagttgttagctggagccaaaatcatt
gaagttggtgatacacctaaggatagagcgctcttcaatggagcccagaaattatttggt
atgatcattaccattgggcaagctattgtgtatgtcatgacggggatgtacggggaccct
gcggaaatgggtgctggaatctgtctcttgatcatcattcagttgtttgttgctggtttg
attgtgctgctgttagatgagctgctacagaagggttacggcttggggtctgggatttcc
ctctttattgccaccaacatctgtgagaccattgtctggaaggcctttagtcccactacc
attaacactggcagaggcaccgagtttgagggagcagtcattgcactgtttcacctgctg
gccaccaggacagacaaggtccgagctctgagggaggcattttatcgtcagaatttaccc
aatctcatgaacctcattgctacagttttcgtgtttgctgttgtcatctattttcaggga
tttcgtgttgacttgcccattaagtcagcccggtatcgaggacaatatagtagctatccc
atcaaactcttctacacctcaaacattcccattatccttcagtcggccttagtttcaaac
ttatatgtgatttcccagatgctgtccgttcgatttagtggcaacttcttagtaaattta
ctaggacagtgggctgacgtcagtgggggaggccctgcccgctcttacccagtcggaggc
ctctgctactatctttctccgccggagtccatgggtgccatatttgaggatcctgtccat
gtcgtcgtttacattatcttcatgttgggatcctgtgcattcttttctaagacttggata
gaggtgtctggttcctcagccaaagatgtagctaagcagcttaaagaacagcagatggta
atgcggggtcacagagatacctctatggttcatgagcttaataggtacatccctacggcg
gctgcgttcggaggcttgtgcattggcgccctctctgtgctggcagacttcctgggagcc
attggatctggcactgggattctgcttgcagtcaccattatttatcagtactttgaaata
tttgttaaggaacaggctgaggttggtgggatgggtgctttgtttttttaa
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