Ochotona princeps (American pika): 101518936
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Entry
101518936 CDS
T07609
Symbol
CYLD
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X2
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04064
NF-kappa B signaling pathway
opi04217
Necroptosis
opi04380
Osteoclast differentiation
opi04622
RIG-I-like receptor signaling pathway
opi04625
C-type lectin receptor signaling pathway
opi04668
TNF signaling pathway
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
101518936 (CYLD)
04668 TNF signaling pathway
101518936 (CYLD)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
101518936 (CYLD)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
101518936 (CYLD)
04625 C-type lectin receptor signaling pathway
101518936 (CYLD)
09158 Development and regeneration
04380 Osteoclast differentiation
101518936 (CYLD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
opi01002
]
101518936 (CYLD)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101518936 (CYLD)
Enzymes [BR:
opi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101518936 (CYLD)
Peptidases and inhibitors [BR:
opi01002
]
Cysteine peptidases
Family C67
101518936 (CYLD)
Ubiquitin system [BR:
opi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101518936 (CYLD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
COX_ARM
Motif
Other DBs
NCBI-GeneID:
101518936
NCBI-ProteinID:
XP_004583898
LinkDB
All DBs
Position
5:23043773..23105461
Genome browser
AA seq
952 aa
AA seq
DB search
MSSGLWSQEKVPSSYWEERIFYLLLQECSVTDKQTQKLLKVPKGSIGQYVQDRSLGHTRI
PSAKGKKNQIGLKILEPPHAVLFVDEKDVVEINEKFTELLLAITNCEERFSLFKNRSRLS
KGLQIDVGCPVKVQLRSGEEKFPGVVRFRGPLLAERTVSGIFFGVELLEEGRGQGFTDGL
YQGKQLFQCDEDCGVFVALDKLEILEDDDNGLESDYAGPVDTMQVELPPLEINSRVSLKV
GETIESGTVIFCDVLPGKESLGYFVGVDMDNPIGNWDGRFDGVQLCSFASVESTLLLHIN
DIIPDSMAQERRPPKLAFMPRGVGDKGSSSHSKPKATGSTSEPGNRNRSELFYTLNGSSV
DSQPQSKSKNAWYIDEVAEDPAKSLTELSPDYGHSSPPLQPPSMNSLPSENRFHSLPFSL
TKMNTNGSIGHNSLSLSVQSVMGELNNAPVQESPPLPVSSSNSHGLEVGSLAEVKENPPF
YGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKLKSCRPDSR
FASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLEIMIGKKKGIQGHYNSCYLD
STLFCLFAFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKLRK
ILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMEKNEK
VGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKLFKKIFPSLELNITDLLEDT
PRQCRICGGLAMYECRECYDDPDISAGKIKQFCKTCNTQVHLHPKRLNHKYNPVSLPKDL
PDWDWRHGCIPCQKMELFAVLCIETSHYVAFVKYGKDDSAWLFFDSMADRDGGQNGFNIP
QVTPCPEVGEYLKMSPEDLHSLDSRRIQGCARRLLCDAYMCMYQSPTMSLYK
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaggcttatggagccaagaaaaagtcccttcatcctactgggaagagcgaatt
ttttatttgcttcttcaggaatgcagcgtcacagacaagcaaacacagaagctcctcaaa
gtcccaaaggggagtataggacagtacgtccaagaccgttccttgggacacacgaggatc
ccttctgccaaaggcaagaaaaatcagatcggattaaaaatcctagagccaccccatgct
gttctctttgtggatgagaaggacgttgtcgaaatcaatgagaagttcacagagttactc
ttggcgattaccaactgtgaggagaggttcagcctgtttaagaacaggagcagactcagt
aaaggcctccagatcgacgtgggctgccctgtgaaggtgcagctgcgatccggggaagag
aagtttcctggagtcgtgcggttcaggggacccctgttagcagagaggacagtgtcgggg
atcttctttggcgtagaattgctggaagaaggtcgtggccaaggtttcactgatgggttg
tatcaaggcaaacagttatttcagtgtgatgaagactgtggagtgttcgttgccttggac
aagctagaaatcctagaagatgacgacaacggactggaaagtgattacgcaggtccagtg
gacacaatgcaggttgaacttccccctttggaaatcaactccagagtttctctgaaagtc
ggagaaactatagaatccggaacggttatattctgcgatgtcttgccaggaaaagaaagc
ttaggatattttgttggtgtggacatggataaccctattggcaactgggatgggaggttt
gacggagtccagctgtgcagctttgccagcgtggagagcacccttctcctgcacattaat
gacatcatcccagatagcatggcacaggaaaggagacctcccaaacttgcctttatgccc
agaggtgttggggacaagggttcatccagtcatagtaaaccaaaggctacaggatctacc
tcagagcctggaaatagaaacagatctgaattattttataccctaaatgggtcttctgtt
gactcacaaccacagtccaaatcaaaaaatgcatggtacattgatgaagttgcagaagac
cctgcgaagtcactgacagagctctctccagactacggccattcttcaccgcccctgcag
cctccgtccatgaactccttgcccagcgagaacagatttcactccttaccattcagtctg
accaagatgaacaccaatggaagcatcggtcacaattcactttctctgtcggttcagtct
gtgatgggagagctaaacaacgccccggtccaggagagcccacccctgcctgtgtcttcc
agcaactcacatggtctagaagtgggttcactggcagaggtgaaagagaacccacccttc
tatggggtaatccgctggattggtcagcctccaggactcaatgaagtactagctggactg
gaactggaggacgaatgtgcaggctgcaccgatgggaccttcaggggcacccggtatttc
acctgtgccttgaagaaggcattgtttgtcaaactcaagagctgcagacctgactccagg
ttcgcttccctgcagcccgtctccaatcagatcgagcgctgtaactctttagcatttgga
ggctacttaagtgaagtagtagaagaaaacactcctccaaaaatggagaaagaaggttta
gagataatgattggcaagaagaaaggcatccagggtcattacaactcttgttacttagat
tcaaccttattctgcttatttgcttttagttctgttctggacactgtgttactgagaccc
aaagagaaaaacgatgttgagtattacagtgagactcaagagcttctgaggacggaaatt
gtgaatcctctgcgaatatacggatatgtgtgtgccacaaaaattatgaaattgaggaaa
atacttgaaaaagttgaggctgcatcaggatttacctcggaagaaaaagatcctgaagaa
ttcttaaatatcctatttcatcatattttaagggtagaaccattgttaaaaataagatca
gcaggtcaaaaagtacaagattgttacttttatcagatttttatggagaaaaatgagaag
gttggcgtccccaccatccagcagttgttggaatggtccttcatcaacagtaacctgaag
ttcgcagaggcaccatcatgtctgattattcagatgcctcggtttggaaaagactttaaa
ttattcaaaaaaatctttccttctctggaattaaatataactgatttacttgaagacact
cccaggcagtgtcgaatctgcggagggctcgccatgtatgagtgtagagaatgctacgac
gacccggacatctcggctggaaaaatcaagcagttttgtaaaacctgcaatacccaggtc
caccttcaccccaagaggctgaatcataaatacaacccagtgtcgctccccaaagacctg
cccgactgggactggagacacggctgcatcccctgccagaagatggagttgtttgctgtg
ctctgcatagagacgagccactacgtggcctttgtgaagtacgggaaagatgactctgcc
tggctgttctttgacagcatggccgaccgggacgggggtcagaacggcttcaacattcct
caggtcacgccgtgcccggaagtcggagagtatttgaagatgtccccggaagacctgcat
tccctggactcgcggaggatccagggctgtgcgcgaagactcctctgtgacgcctacatg
tgcatgtaccagagtcccaccatgagcctgtacaagtga
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