Ochotona princeps (American pika): 101519036
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Entry
101519036 CDS
T07609
Symbol
POM121C
Name
(RefSeq) nuclear envelope pore membrane protein POM 121C isoform X2
KO
K14316
nuclear pore complex protein Nup121
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03013
Nucleocytoplasmic transport
opi05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101519036 (POM121C)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101519036 (POM121C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101519036 (POM121C)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101519036 (POM121C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
101519036
NCBI-ProteinID:
XP_004587045
LinkDB
All DBs
Position
6:26734279..26750743
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AA seq
968 aa
AA seq
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MVCSPVTVRIAPPDSKPSRPPPPGWTFSSTVSSPSISTPDPCAKETVLNALKERKKRTME
EEDPIALDGLENKRRRHDSSGSGHSAFEPLVANGVPAAFVPKPGSLKRGLNSQNADDHSS
KRSRTSSVSSLASTCAGGVPSSSRNAISSSYSSTRGFPQPWKKSGPPASPFSSPASSRSQ
TPERPAKKTREEEPPQHSSSSPPLVTDKESQGEGAADATPWKKQNSESSPLAHGSTGQRK
RKIQLLPSRRGEQLTLPPPPQLGYSVTAEDFDMEKKASLQWFNKALEDKTDTTSDTAAEN
PPTTQAPLTFSLPAISTSASPASLPTAPSTNPLLESLKKMQGTPGPPAATEPAAAATTLT
PSPPKVPSLLAPATCAQPEPLVDTSSDSKPAAPLLRLSPASATTPVADATKSPSVAPQAE
PPAKAPSPTASKLLDMLGSSPAQPASPEAPARAAASPVFKPIFSAPLKSENESPVVTATA
PASTAAPTATSSASSPTFKPIFSSMGLSAPIPLATPFSFKQTTTAATTPASAAPLFSGLA
AATSTVASATVVSSSADSAKPVFGFGLGAVTSAPSSMASSSTTASTTTAQPFLFGAPPAS
GASLTPSMGSIFQFGKPAVPTSTTVTTTFGQSLASTAPTATSSTAGFSGFGSLTTSASAA
SSQPTLTFSTTSQAFNIPFGSATKPSLPSFTGTNPQPAFGATDGQQQQGAAKPTLAPSFG
SSFSFGAPAPAPAPSTTPGLAPAQPAFGSTVQSSFGGLKNTATAFGTAATTQPAFGSGST
VFSFGASTTTGFGASTPTTSSGTSSSVFGSTTLSPFTFGSPAAPAASGGFGLNVGTPGAS
STSGAFSFGAGQSGTTGTATPFGGALSQNSLGTPNQTTPFAFNMASTPESKPVFGGTSTP
TFGQNASTPGAVTAGSSLSFGASSTPTQGFVGVGPFGSAAPSFSIGAGSKTPGARQRLQA
RRQHTRKK
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgtagccccgtgactgtgcgcatcgcccctcctgacagcaagccaagccggccc
ccgcccccggggtggacattcagctctaccgtgtcctcgccatccattagcaccccagac
ccgtgtgccaaggagactgtgctgaatgccctcaaggagaggaagaagaggaccatggag
gaggaagacccaatagctctggatggcctggaaaataaaaggaggcgccatgacagcagc
gggagtggccattccgccttcgagcccctggtggccaatggagtccccgctgcttttgtg
cctaagcctgggtctctgaagagaggtctcaattcccaaaatgcagacgaccactcgagt
aagaggtcacgcacctcctccgtgagctccctggctagcacatgcgccgggggcgtcccc
agctccagccgcaacgccatcagcagctcctacagctccacccgtggcttcccacagcca
tggaagaagagcggtcctccggcatcccccttctctagccctgcttcctcccgctcccag
acgcctgagaggccagccaagaaaaccagggaggaagaaccgcctcagcattccagctcg
tcacccccgctggtgacggacaaggagtcccagggcgaaggggctgcagatgcaacccca
tggaagaagcagaactcggagagctctcccttggcgcatggcagcactggccagcggaag
cgcaagatccagctgctaccctcccggcgcggggagcagctgaccctgcctcctccgcca
cagctgggttactctgtcactgcagaggacttcgacatggagaagaaagcttccttgcag
tggttcaacaaggcgctggaggacaagaccgacaccacctctgacacggcagctgaaaac
ccacccaccacccaggcacctcttaccttctccctgcctgccatcagcacctcggcctcc
ccggccagcctccccactgccccaagcaccaacccgctgctggagagcctgaagaagatg
cagggtacccccgggccgccggccgcaacagaacctgctgctgcggccaccacactaacc
ccttcacctccgaaggtgcccagcctcctggcccctgccacctgtgcgcagccagagccc
ctggtagacacgtcctcggactctaagcccgcagcccctctcctgaggctgagccctgct
tctgccacaacgcctgtcgctgatgccaccaagtccccttctgtggcccctcaggccgag
ccacctgccaaagccccatcgcccacagccagcaaattgctggacatgctgggctcctca
cccgctcagcctgcctcgcctgaggctcctgccagagctgcggcctctcccgtgttcaag
cccatcttctcggcaccactgaaaagcgagaatgagagccccgtggtcacagccacagca
cctgccagcaccgctgcccccactgccacgagcagcgcctccagccccaccttcaagccc
atcttcagcagcatggggctgtctgctcccatacccttggccactcccttctcctttaag
cagaccaccacggcagccaccaccccagcctctgctgcccctctcttctctggcctggct
gctgccacctccactgtggcctctgccaccgtagtcagctcatctgcagactccgcgaag
cccgtgtttggctttggccttggcgccgtgacgagcgctcctagcagcatggccagcagc
agcaccacagcctccaccaccacggcgcagcctttcctgtttggggctccccctgcctca
ggtgccagcttgaccccctccatgggctccatattccagtttggcaagcctgccgtgccc
acctccaccacagtcaccaccacctttggccagtcccttgccagtactgcccccacggcc
accagcagcacggcagggttcagcggctttggctcactcaccacctcagcctccgccgcc
tccagccagcccacactgaccttcagcaccaccagccaggccttcaacattcccttcggc
tcggccaccaagccctctctcccgtcgttcacgggaaccaacccccagcctgcgtttggg
gccactgatggccagcagcagcagggggctgcaaagccaaccctggccccgagcttcggc
agctcattttccttcggggccccagccccagccccagccccgagcaccacacccgggctg
gcccctgcccagccagcttttggcagcactgtgcagtcctccttcggtggcctgaaaaac
acagccaccgccttcggcaccgctgccaccacccagccggcctttgggagcggcagcacg
gtgttctcctttggggcgtccaccaccacgggcttcggggcgtccaccccaaccaccagc
agcgggaccagcagctcggtgtttggcagcacaactctgtcgcccttcacgttcgggagc
ccggctgccccggctgccagcggtggctttgggctcaatgtgggcaccccaggtgccagc
tccacctcgggagccttcagcttcggggctggacagagtgggaccacaggcactgccacc
ccctttgggggggccttgagtcagaacagcctggggacccccaaccagactaccccattt
gccttcaacatggctagcacgcccgagagcaagcccgtgtttggaggtacctccacgccc
acctttgggcagaacgcctctacccctggagccgtcacagcgggcagcagcttgtccttc
ggggcgtcctcaacccctacccagggttttgtcggcgtgggaccttttgggtcggcggcc
ccttccttctccattggtgcagggtccaagaccccaggggcccgacagcgcctgcaggct
cggaggcagcacacgcgcaagaaatag
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