Ochotona princeps (American pika): 101521175
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Entry
101521175 CDS
T07609
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
opi01002
]
101521175 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101521175 (USP47)
Enzymes [BR:
opi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101521175 (USP47)
Peptidases and inhibitors [BR:
opi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101521175 (USP47)
Ubiquitin system [BR:
opi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101521175 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
101521175
NCBI-ProteinID:
XP_012784842
LinkDB
All DBs
Position
1:67070400..67166048
Genome browser
AA seq
1315 aa
AA seq
DB search
MVPGEENQLVPKEIENAAEEPRVLCIIHDITNSKTVNERITLNLPASTPVRKLFEDVANK
VGYINGTFDLAWGNGISTADMAPLDHTSEKSLLDANFEPGKKNFLHLTDKDGEQPQILLE
DSNTVDDSVHDRFIGPLPREGSLGSTSDYVSQNYSYSSILNKSETGYVGLVNQAMTCYLN
SLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETTDVTRSF
GWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINELYQGKLKDYVRCLECGYEGWR
IDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFL
HFPYLLTLQLKRFDFDYTTMHRIKLNDRMSFPEELDMSTFIDVEDEKSPQTESCTDSGAE
NEGSCHSDQMSNDFSNDDGVDEGICLENNTGTEKIAKPGLEKNSLIYELFSVMVHSGSAA
GGHYYACIKSFSDEQWYSFNDQHVSRITQEDIKKTHGGSSGNRGYYSSAFASSTNAYMLI
YRLKDPTRNAKFLEVDEYPEHIRNLVQRERELEEQEKRQREIERNTCKIKLFCLHPVKQI
MMENKLEVHKDKTLKEAVEMAYKLMDLEEIIPLDCCRLVKYDEFHDYLERSYEGEEDTPM
GLLLGGVKSTYMFDLLLEIRKPDQVFQSYKPGEVMVKVHVVDLKAESVAVPVTVRAYLSQ
TVTEFKQLISKVFVESSETLDYQMAFTDSHLWKLLDRHANTIRLFVLLPEQSPGSYSKRT
GYQKAGGDSSNVDDDCERVKGPAGSLKSVEAILEESTEKLKSLSLQQQQDGDNGDSSKST
ETSDFENIESPLNERDSSTSVDNRELDQHIQTSDPEHFQSEERSDSDVNNDRSTSSVDSD
ILSSSHSSDTLCNADSAQIPLANGLDSHSITSSRRTKANEGKKETWDTAEEDSGTDSEYD
ESGKSRGEMQYMYFKAEPYAADEGSGEGHKWLMVHVDKRITLAAFKQHLEPFVGVLSSHF
KVFRVYASNQEFESVRLNETLSSFSDDTKITIRLGRALKKGEYRVKVYQLLVNEQEPCKF
LLDAVFAKGMTVRQSKEELIPQLREHCGLELSIDRFRLRKKTWKNPGTVFLDYHIYEEDI
NISSNWEVFLEVLDGVEKMKSMSQLAVLSRRWRPSEMKLDPFQEVVLESNNVDELREKLS
EISGIPLEDIEFAKGRGTFPCDISVLDIHQDLDWNPKVSALNVWPLYICDDGAVIFYRDK
TEEVMELTDEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccggcgaggagaaccagttggtcccgaaagagatagaaaatgctgctgaagaa
cctagagtcttatgtataatacacgatattactaattcgaagacagtgaatgagcggatc
actttaaatttgccagcttctactccagtcagaaagctctttgaagatgtggccaacaaa
gtaggctacataaatggaacctttgatttggcatggggaaacggaatcagtactgctgat
atggctccactggatcataccagtgagaagtctcttcttgatgctaattttgagccagga
aagaagaactttctgcatttgacagataaagatggtgaacaacctcaaatacttctggag
gattctaataccgtggatgacagtgttcatgacaggtttataggtcctcttccaagagaa
ggttctttgggctctaccagtgattatgtcagccagaactactcctactcgtctattttg
aataaatcagaaactggatatgtgggattagtaaaccaggcaatgacatgctatttgaat
agccttttgcagacactgtttatgacacctgaatttaggaatgcactatataagtgggaa
tttgaagaatcagaagaagatccagtgacaagtatcccataccaacttcagaggcttttt
gttttgttgcaaaccagcaagaaaagagccattgaaactacagatgttacaagaagcttt
ggatgggatagcagtgaggcttggcagcaacatgatgtacaagaactgtgcagagtcatg
tttgatgctttggaacagaaatggaagcaaacagaacaggctgatcttataaatgagctg
tatcaaggcaaactgaaggactacgtgaggtgtctggaatgtggttatgagggctggaga
atcgatacctaccttgatattccactggtcattcgaccttatggatcgagccaagcattt
gctagtgtggaagaagcattgcatgcatttatccagccagagatcctggatggcccaaat
caatacttctgtgaacgctgtaagaagaagtgtgatgcgcgaaagggtcttcggttttta
catttcccttatctcctgaccttacagttgaaaaggtttgattttgattatacaaccatg
catagaattaaattgaatgatcgaatgtcatttcctgaggaactggatatgagtacattt
attgatgttgaagatgagaaatctcctcagactgaaagttgcactgacagtggggcagaa
aacgaaggtagttgtcacagtgatcagatgagcaatgatttctccaatgatgatggtgtt
gatgaaggaatctgcctggaaaacaatactggaactgaaaagattgcaaaacctggactt
gaaaagaattccttgatctatgagctgttctctgttatggttcactcggggagtgctgct
ggtggtcattattatgcttgtataaagtcattcagtgatgagcagtggtacagcttcaat
gatcagcatgtgagcaggataacacaagaggacattaagaaaacacatggtggatcttcg
ggaaacagaggatattattctagtgcttttgcaagctctacaaatgcatatatgctgata
tatagactgaaggatccaacaagaaatgcaaaatttttagaagtggatgaatatccagaa
catattagaaatctggtgcagagagaaagagaattggaagaacaagaaaagagacaacga
gaaattgaacgcaacacatgcaagataaagttattctgtttgcatcctgtgaagcaaata
atgatggaaaataaattagaggtccataaggataagaccttaaaggaagcagtggaaatg
gcttacaagttgatggatttggaagagataatacccctggattgctgtcgccttgtgaag
tacgatgagtttcatgattatctggaacgatcatatgaaggagaagaagatacgccaatg
ggacttctcctaggtggcgtcaaatcaacatatatgtttgatctgctgttggagataagg
aagcctgatcaagttttccaatcttataaacctggagaagtgatggtgaaagttcatgtt
gttgatctaaaggcagaatctgtagctgttcctgtaactgttcgtgcttacttaagtcag
acagttacagagttcaagcagctgatttcaaaggtgtttgttgagagttcagagactttg
gattaccagatggcctttacagactcccatctatggaaactcctggatcggcatgcaaat
acaatccgactatttgttttgctacctgaacagtctccaggatcttattccaaaaggaca
ggataccagaaagctgggggtgattcgagtaatgtggatgatgattgtgaaagagtcaaa
ggacctgcaggcagtctgaagtctgtggaagctattctagaagaaagcactgaaaaactc
aaaagcttgtcactgcagcagcagcaggatggagataacggggacagcagcaaaagtact
gagacaagtgattttgaaaacattgaatcacctctcaatgagagagactcctccacatca
gtggacaacagagaactggaccaacatattcagacttccgatccagaacattttcagtct
gaagaacgatcagactcagatgtgaacaacgaccggagtacaagctcagtggacagtgat
atccttagttccagtcacagcagtgatactttgtgcaatgcagacagtgcccagatcccc
ttggctaatggacttgattctcacagtatcacaagtagtagaagaactaaagcaaatgaa
gggaaaaaagagacgtgggatacagcagaagaagactccggaactgatagtgaatatgat
gagagtggcaagagtaggggagaaatgcagtacatgtatttcaaagcagaaccctatgct
gcagatgaaggttctggggaaggccataaatggttgatggtgcatgttgataaaagaatt
actctggcagctttcaaacaacatttagagccctttgttggagttttgtcctctcacttc
aaggtctttcgagtatatgccagcaatcaagagtttgagagcgtccgactgaatgagaca
ctttcatcattttcagatgacactaagattacaattagactggggagagcacttaaaaaa
ggagaatacagagttaaagtgtaccagcttttagtcaatgaacaagagccatgcaagttt
cttctagatgctgtgtttgctaaaggaatgactgtgcggcaatcaaaagaggagttaatt
cctcaactcagggagcattgtggtttagagctcagtattgacaggtttcgtctacggaaa
aaaacatggaagaatcctggcactgtgtttttggattatcatatttatgaagaagatatt
aatatttccagcaactgggaggttttccttgaagttcttgatggggtagagaagatgaag
tccatgtcacagcttgcggttttgtcacgccggtggaggccttcggagatgaagctggat
cccttccaggaagttgtactggaaagcaataatgttgatgaactgcgagagaagcttagt
gaaatcagcgggattcctttggaagatattgaatttgccaagggcagaggaacttttccc
tgtgatatttctgtccttgatattcatcaggatttggactggaatcctaaagtttctgcc
ctgaatgtctggcctctttatatctgtgatgatggtgcagtcatattttatagggataaa
acagaagaagtaatggagttgacagatgaacagagaaatgaactcatgaaaaaagaaagc
agtcgactccagaagactggacatcgtgtaacgtattcccctcgtaaagagaaagcacta
aaaatatatctggatggagcaccaaataaagatctgactcaagactga
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integrated database retrieval system
