Ochotona princeps (American pika): 101525655
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Entry
101525655 CDS
T07609
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi02010
ABC transporters
opi04976
Bile secretion
opi05206
MicroRNAs in cancer
opi05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101525655 (ABCB1)
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
101525655 (ABCB1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
101525655 (ABCB1)
09162 Cancer: specific types
05226 Gastric cancer
101525655 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
opi02000
]
101525655 (ABCB1)
04147 Exosome [BR:
opi04147
]
101525655 (ABCB1)
04090 CD molecules [BR:
opi04090
]
101525655 (ABCB1)
Enzymes [BR:
opi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
101525655 (ABCB1)
Transporters [BR:
opi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
101525655 (ABCB1)
Exosome [BR:
opi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101525655 (ABCB1)
CD molecules [BR:
opi04090
]
Proteins
101525655 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Rad17
AAA
Zeta_toxin
RsgA_GTPase
AAA_5
AAA_29
AAA_21
AAA_7
G-alpha
APS_kinase
AAA_15
nSTAND1
NTPase_1
DUF815
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
101525655
NCBI-ProteinID:
XP_004582336
LinkDB
All DBs
Position
10:37332668..37401667
Genome browser
AA seq
1277 aa
AA seq
DB search
MDFEGERNGRLGGKNMYKLDKKSKKEKAEKRPTVSTFTMFRYSNWLDKLYMVVGTLAAII
HGAALPLMMLVFGEMTDSFSNAGSAIPGNGSFPNISMSEIYAELEKNMTRYAYYYTGIGA
GVLIAAYIQISFWGLAAGRQINKIRKQFFHAIMRQEIGWFDVHDVGELNTRLTDDVSKIN
EGIGDKIGMFFQSVATFLIGFIVGFTRGWKLTLVILAISPVLGLSAAIWAKILSSFTDKE
LLAYAKAGAVAEEVLAAIRTVIAFGGQDKELERYNKNLEEAKRIGIKKAITANISIGAAF
LLIYASYALAFWYGTTLVISKEYTIGQVLTVFFSVLVGAFSIGQASPNIEAFANARGAAY
EVFKIIDNEPSIDSYSENGHKPDNIKGNLEFRNVHFSYPSRKEVKILKGLNLKVQSGQTV
ALVGNSGCGKSTTIQLMQRLYDPTEGVVSIDGQDIRTMNVRYLREITGVVSQEPVLFATT
IAENIRYGRENVTMEDIERAVKEANAYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAIAR
ALVRNPKILLLDEATSALDTESEAVVQVALDKAREGRTTIVIAHRLSTVRNADVIAGFDN
GVIVEKGNHDELMKEKGVYFKLVTMQTGGNEVELGNAASESKSEKMDLVEMTSKESGSSL
IRKRSTRRSTRGAQGQDSKLETDEAQNESVPPVSFWRIMKLNITEWPYFVVGVLCAIING
GLQPAFAVIFSKIVGIFARDDDDETKRRNSDLFSLLFLILGIISFITFFLQGFTFGKAGE
ILTKRLRYMVFKAMLRQDASWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIAQNIAN
LGTGIIISFIYGWQLTLLLLIIVPIIAIAGVIEMKMLSGHALKDKKELEGSGKIATEAIE
NFRTVVSLTREQKFENMYANSLQVPYRNSLKKAHIFGITFSFTQAMMFFSYAACFRFGAF
LVAREIMTFENVLLVFSAVVFGAMAVGQVSSFAPDYAKAKISASHIIGILERIPLIDSYS
TEGLKPNTMEGNMTFREVVFNYPTRPDIPVLQGLNLDVKKGQTLALVGPSGCGKSTVVQL
IERFYDPLAGTVLLDGKQINELNVQWLRAHLGIVSQEPILFDCSIGENIAYGDNSRVVSQ
EEIVKAAKEANIHAFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEA
TSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADMIVVFQNGRVKECGTHHQLLA
QRGIYYTMVSVQAGAKR
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgaaggggaacgcaatggaagactcggagggaagaacatgtacaagctggat
aagaaaagtaaaaaagagaaggcagaaaagagaccaactgtcagcacatttacaatgttc
cgctattcaaattggcttgacaagttatacatggtggtagggaccctggctgctatcatc
catggagccgcactgccgcttatgatgctggtgtttggagaaatgacggacagcttttca
aatgcaggaagcgcgattcccggaaacggcagttttcccaacatcagcatgtctgaaatc
tatgcagagctggagaaaaacatgaccagatacgcctactactacactgggatcggagct
ggtgtgcttattgctgcttacatccagatttcattttgggggctggcagctggaagacaa
ataaataaaatcagaaagcagttttttcatgctataatgcgacaggagataggttggttc
gacgtgcatgatgttggagagttgaacacccggctcacagatgatgtttccaaaatcaat
gaggggatcggcgacaaaattggaatgttctttcagtctgtggcaacgtttttaatcggt
ttcatagtaggatttacacgtggttggaagctaacgctggtgattttggccatcagtcct
gttcttggactgtcagctgctatctgggcaaagatactgtcttcatttactgataaagaa
ctcttagcatatgcgaaagcaggagccgtggctgaagaagtcttagcagcaattagaact
gtaattgcatttggaggacaagataaagaacttgaaaggtacaataaaaatttagaagaa
gctaaaagaattgggataaagaaagctattacagccaacatatctataggtgctgctttc
ctgctgatctatgcatcatatgctctggccttctggtatgggaccactctggtcatctcg
aaagaatatactattggacaagtactcactgtcttcttttctgtattagttggagctttt
agtattggccaggcatctccaaatattgaagcatttgcaaatgcaagaggagcagcttat
gaagtcttcaagatcattgataatgagccaagcatcgacagctattcagagaatgggcat
aagccagataatattaagggaaatttggaatttagaaatgttcacttcagctacccttct
cggaaagaagtcaagatcttaaagggcctcaacctgaaggtgcagagtggacagacagtg
gccctggtgggcaacagcggctgcgggaagagcaccaccatccagctaatgcagagactc
tatgaccccacggagggcgtggtcagcatcgacggacaggacatcaggaccatgaacgtc
cgatacctgcgggaaatcacaggcgtggtgagtcaggagcccgtgctgtttgccaccacc
atagcagaaaacatccgctacggtcgtgagaatgtcaccatggaggacattgaaagagct
gtcaaggaagccaatgcctacgatttcatcatgaaactgcctcataaatttgacacgctg
gttggagagagaggggcccagctgagcggtggccagaaacagagaatcgccattgcccgt
gcactggttcgcaacccaaagatcctcctgctggatgaggccacgtcggctttggacaca
gagagtgaagctgtggttcaggtggctctggataaggctagagaaggccggaccaccatt
gtgatagctcaccgtttgtccacagttcggaatgctgatgtcattgctggttttgataat
ggagtcattgtggagaaaggaaatcatgatgaactcatgaaagaaaagggtgtttacttc
aaacttgtcaccatgcagacaggaggaaatgaggttgagttaggaaatgcagctagtgaa
tccaaaagtgagaagatggatttggtagaaatgacttccaaagagtcagggtccagtctg
ataagaaagaggtccactcgcaggagcactcgtggagcacaaggccaagacagcaagctt
gagactgacgaggcccagaatgaaagtgtccctccagtttccttttggaggattatgaag
ctgaatataactgagtggccatattttgtggtgggtgtgttgtgtgccattataaatgga
ggcctacaaccagcatttgcagtaatattttccaagattgtaggaattttcgcaagagat
gatgatgatgaaacaaaacggcggaacagtgatctgttttccctgttatttctcattctt
ggaattatttctttcattacatttttccttcagggcttcacctttggcaaagctggagaa
atcctcaccaagcgcctgcgctacatggtgttcaaggccatgctgagacaggacgcgagc
tggttcgatgaccctaaaaatacgactggagcactgaccaccaggctcgccaatgatgct
gctcaagtcaaaggggctactggttccaggcttgctgtaattgcccagaacatcgcaaat
cttgggacaggaattattatatcctttatctatggttggcagttaacactactgctccta
ataattgtacccattattgcaatagctggagttattgaaatgaaaatgttgtctggacat
gcactaaaagataagaaagaactggaaggttctggaaagattgccacagaagcaatagag
aatttccgaacggtcgtgtccctgactcgggagcagaagtttgaaaacatgtatgcaaac
agcttgcaggtgccctacagaaactccttgaaaaaagcacacatctttggaatcaccttt
tccttcacccaggcgatgatgtttttttcctatgctgcctgttttcgatttggtgccttc
ttggtggcgcgtgagattatgaccttcgaaaatgttcttctggtcttttcggcagtcgtc
ttcggtgccatggccgttgggcaggtcagctcgtttgctcccgactatgccaaagccaag
atatcggcatcccacatcattgggatcctggagagaatccctttgattgacagctacagc
acagagggcctaaagccgaacacgatggaaggaaatatgacattcagggaagtcgtgttc
aactaccccacccgacctgacattccagtgctgcaggggctgaacctggatgtgaagaag
ggccagacgctggccctggtgggccccagtggctgtgggaagagcaccgtggtgcagctc
attgagcgcttctatgaccccttggctgggacagtgctgttggatggcaaacaaataaac
gagctgaatgtccagtggctgcgagcccacctgggcatcgtgtcgcaggagcccatcctg
tttgactgcagcatcggtgagaacattgcctacggggacaacagccgggtggtgtcccag
gaggagatcgtgaaggcggccaaggaagccaacatccacgccttcattgactctctgcct
gataaatacaacacccgcgtgggagacaaagggactcagctctcgggcggccagaagcag
cgcatcgccatcgcacgcgccctcgtgcgacagcctcacatcctgcttctggatgaagcc
acatctgcgttggatacggaaagtgagaaggtggtccaagaggccctggacaaggcacgg
gaaggccgcacctgcatcgtgattgctcaccgcctgtctaccatccagaatgccgacatg
atagtggtcttccagaacggccgagtcaaggagtgtggcacgcaccaccagctgctggcg
cagaggggcatctattacaccatggtcagcgtccaggctggagcaaagcgctga
DBGET
integrated database retrieval system
