Ochotona princeps (American pika): 101527216
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Entry
101527216 CDS
T07609
Symbol
MATN4
Name
(RefSeq) matrilin-4 isoform X1
KO
K19467
matrilin
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
opi04990
]
101527216 (MATN4)
Domain-containing proteins not elsewhere classified [BR:
opi04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
101527216 (MATN4)
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Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
FXa_inhibition
cEGF
EGF_CA
Matrilin_ccoil
VWA_3
EGF
EGF_3
hEGF
DUF1194
Motif
Other DBs
NCBI-GeneID:
101527216
NCBI-ProteinID:
XP_004585900
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Position
4A:complement(29399465..29410258)
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AA seq
584 aa
AA seq
DB search
MRGLAACPMLALLLLLLQAWESQPQAAGPKCHTGPLDLVFVIDSSRSVRPFEFETVRQFL
VGLLRSLDVGLNATRVGVIQYSSQVQSVFPLGAFSRREDMERALRALVPLAQGTMTGLAI
QYAMNVAFSVAEGARPPEQRVPRVAVIVTDGRPQDRVAEVAAQARARGIEIYAVGVQRAD
VGSLRAMASPPLEEHVFVVETFDLIQEFGRQLHGRLCGTDLCAEGRHGCQHRCVNARGAF
HCTCNPGYQLAADNRSCVAVDHCSWGNHSCQHECVSTLQGPRCRCREGHDLLPDGRSCHI
RDLCNGVDHGCEFECVSEGLTYRCLCPEDWQLQADGKSCTRCREGHVDLVLLVDGSKSVR
PQNFELVKRFVNQIVDFLDVSPEGTRVGLVQFSSRVRTEFPLGRYGTAAEIKQAVLAVEY
MERGTMTGLALRHMVEHSFSEAQGARPRALHVPRVGLVFTDGRSQDDISVWAARAKEEGI
VMYAVGVGKAVEEELRTIASEPAELHVSYSPDFNTMTHLLENLKGSICPEEGIGAGTELR
SPCDCESLVEFQGRTLGTLDSLTQKLAQLSVRLENLENVLGSQK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaggggccttgctgcctgcccaatgcttgcgctgctgctgctgctgctccaggcctgg
gaaagccagccccaggcggcaggtcccaagtgccatacaggccccctggatttggtgttc
gtgattgacagttcccgcagcgtgcgtccttttgagttcgagaccgtgcggcagttcctg
gtgggcctcctccgcagcttggatgtggggctcaacgccacgcgcgtcggtgtcatccag
tactcaagtcaggtgcagagcgtcttccccctgggagccttctcgcgccgcgaggacatg
gaacgcgccctccgcgccctggtgccgctggcccagggcaccatgaccgggctggccatc
caatatgccatgaacgtggctttcagcgtggccgagggcgcgcgccccccggagcagcgc
gtgccgcgcgttgccgtcatcgtgaccgacgggcggccccaggaccgcgtggccgaggtg
gcagcccaggcccgtgcccgcggcatcgagatttacgcggttggggtgcagcgcgcggat
gtgggctccctgcgcgccatggcgtccccgccgctggaggagcacgtcttcgtcgtggag
acctttgacctcatccaggagtttggccggcagctccacggccgcctgtgcgggacagac
ctgtgtgctgaggggagacacggctgccagcaccggtgtgtcaacgcccgaggcgcgttc
cactgcacctgcaaccctggttaccagctggcggcagacaaccggagctgtgtggctgtt
gaccactgcagctgggggaaccatagctgccagcacgagtgtgtcagcaccctccagggg
cctcgatgccgctgcagagagggacatgacctgctgcccgatgggaggagctgtcacatc
cgtgacctttgcaatggcgtggaccatggctgtgagtttgagtgtgtgagcgagggcctc
acctaccgctgcctatgtcccgaggactggcagctccaggcggatggcaagagctgcacc
cggtgtcgagaaggtcatgtggacctggttctgcttgtggatggctccaagagcgtgcgc
ccgcagaactttgagctggtgaagcgcttcgtgaaccagattgttgatttcctggacgtg
tctcccgagggcacgcgcgtggggctggtacagttctccagccgcgtgcgcactgagttc
ccgctgggccgctacggcaccgcggccgagatcaagcaggcggtcctggccgtggagtac
atggagcgagggaccatgaccgggttggcgctgcggcacatggtggagcacagcttctct
gaggcacagggcgcgcgaccccgcgctctccacgtgcctcgcgtgggcctggtcttcacc
gacggccgctcccaggatgacatctcggtgtgggcagcgcgcgccaaggaggaaggcatc
gtcatgtacgcggtgggcgtgggcaaggcggtggaggaggagctgcgcaccatcgcctcg
gagcccgccgagctgcacgtgtcgtactcgcccgacttcaacaccatgacgcacctgttg
gagaatctcaaaggcagcatctgcccggaggagggcatcggtgccgggacagagcttcgg
agtccctgtgactgtgaaagcctggtggagttccagggtcgcacgctggggacactagac
agcctgacacagaagttggcccagctgtccgtgcgcctggagaacctggagaacgtgctg
ggcagccagaagtga
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