Ochotona princeps (American pika): 101529007
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Entry
101529007 CDS
T07609
Symbol
GTF2H4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03022
Basal transcription factors
opi03420
Nucleotide excision repair
opi05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101529007 (GTF2H4)
09124 Replication and repair
03420 Nucleotide excision repair
101529007 (GTF2H4)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
101529007 (GTF2H4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opi03021
]
101529007 (GTF2H4)
03400 DNA repair and recombination proteins [BR:
opi03400
]
101529007 (GTF2H4)
Transcription machinery [BR:
opi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101529007 (GTF2H4)
DNA repair and recombination proteins [BR:
opi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101529007 (GTF2H4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
fvmJAB_N
Motif
Other DBs
NCBI-GeneID:
101529007
NCBI-ProteinID:
XP_004598789
LinkDB
All DBs
Position
12:29117639..29122876
Genome browser
AA seq
463 aa
AA seq
DB search
MESTPSRGGLNRVHLQCRNLQEFLGSLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRM
LFLEQPLPQAAVALWVKKEFSKAQEQSTGLLSGLRIWHTQLLPGGLQGLILNPIFRQNLR
IALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLL
SQAGLMKSSEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQ
LSFSTLGKDYSVEGMSDSLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGVSGVGG
TVHQPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGI
TAQQIIHFLRTRAHPVMLKQNPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFE
LLLAHARELGVLLFENSAKRLMVVTPAGHSDVKRFWKRQKHSS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggagagtaccccttcaaggggtggattgaaccgggtgcatctacaatgcaggaatctg
caggaattcctagggagcctcagccctggggttttggatcgattgtatgggcaccctgcc
acctgtctggctgtgtttagagagctcccgtctctggctaagaactgggtgatgcgcatg
ctgttcctggagcagcctttgccacaagctgcagtagccctgtgggtgaagaaggagttc
agcaaggctcaggagcaaagtacagggctgctgagtggcctccgcatttggcacacccag
ctgctccccggcggcctccagggcctcatcctcaaccccatcttccgccagaacctccgc
attgcccttctgggtggggggaaggcctggtctgatgacacaagtcagctgggaccggac
aagcatgcccgggatgtcccctccctggataagtatgcagaggagcgctgggaggtggtc
ttgcacttcatggtgggctcccccagtgccgctgtcagccaggacttggcccagctgctc
agtcaagctgggctcatgaagagttcagaaccaggagagccaccctgcattacttctgct
ggctttcagtttctgctgctggacacccctgcccagctttggtacttcatgttgcagtac
ctgcagacagcccagagccggggcatggacctcgtggagattctgtccttcctattccag
ctcagcttctccactcttggcaaggattactctgtggagggcatgagtgactctctgttg
aacttcctgcagcacctgcgtgagtttgggcttgtcttccagagaaagaggaaatctcgg
cggtactaccccacacgcctggccatcaatctctcttcaggtgtctcgggggtagggggc
actgtgcaccagccaggcttcatcgttgtggaaaccaattaccggctgtatgcctacaca
gagtcggagctgcagatagcactcatcgccctcttctccgagatgctctatcgcttcccc
aacatggtggtggcacaggtgacccgcgagagcgtgcagcaggccattgccagcggcatc
acagcccagcagatcatccatttcctgaggacaagggcccacccagtgatgctcaaacag
aacccggtgctgccccccaccatcacagaccagattcgcctgtgggagctggaaagggac
agactccgcttcactgagggcgtcctgtacaaccagttcctgtcgcaagtggactttgag
ttgctgctggcccacgcacgggagctgggcgtgctgctcttcgagaactcggccaagcgg
ctcatggtggtgaccccggccgggcacagcgacgtgaagcgcttctggaagcggcagaag
cacagttcctga
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