Ochotona princeps (American pika): 101532077
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Entry
101532077 CDS
T07609
Symbol
TRAF1
Name
(RefSeq) TNF receptor-associated factor 1
KO
K03172
TNF receptor-associated factor 1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04064
NF-kappa B signaling pathway
opi04210
Apoptosis
opi04668
TNF signaling pathway
opi05200
Pathways in cancer
opi05202
Transcriptional misregulation in cancer
opi05203
Viral carcinogenesis
opi05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
101532077 (TRAF1)
04668 TNF signaling pathway
101532077 (TRAF1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
101532077 (TRAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101532077 (TRAF1)
05202 Transcriptional misregulation in cancer
101532077 (TRAF1)
05203 Viral carcinogenesis
101532077 (TRAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
101532077 (TRAF1)
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Gene cluster
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Motif
Pfam:
TRAF-mep_MATH
TRAF_BIRC3_bd
Motif
Other DBs
NCBI-GeneID:
101532077
NCBI-ProteinID:
XP_004595020
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Position
1A:9650764..9665994
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AA seq
415 aa
AA seq
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MASSSAGSPHPAPDENEFPFGCPPTASQDPSEPRALCCTVCLPENLRNSEDRICLACKGD
DLQSASPGSLRTQEKLLPEVAEAGAGCPFAGVGCCFKGNAESLQEHEATSQASHLNLLLG
FMKQWKAQLGSGLGSGPMALERNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELALQHF
MKEKLLTELEGKLRVFENIVAVLNKEVEASHLALAASIHQSQLDRERILSLEQRVVELQQ
TLAQKDQALGKLEQSLRLMEEASFDGTFLWKITNVTRRCHESACGRTVSLFSPAFYTAKY
GYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDA
FRPDLSSASFQRPQSETNVASGCPLFFPLNKLQSPKHAYVKDDTMFLKCIVETST
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgagctcagctggcagcccccacccagcccccgatgagaacgagtttcccttt
gggtgtcccccgaccgcctcccaggacccgtcggagcccagggccctttgctgcacagtc
tgccttccagaaaacctgaggaacagcgaggaccggatctgtcttgcctgcaaaggggac
gatcttcagtctgcgagcccaggaagcctgcggacacaggagaagcttcttccagaggtg
gctgaggctggagctgggtgccccttcgcaggcgtcggctgctgcttcaaggggaatgca
gaatccttgcaagagcatgaggccacctcccaggcctcccatcttaacctattgctggga
ttcatgaagcagtggaaggctcagctgggctctggcctggggtccgggcccatggccttg
gagcggaacctgtcagacttgcaactgcaggctgccgtggaggtggcgggtgacctggag
gtggactgctaccgggcaccctgctctgagagccaagaggagctagccctgcagcacttc
atgaaggagaagctcctgaccgagctggaggggaagctgcgtgtgtttgagaacatcgtc
gctgtcctcaacaaggaggtggaggcctcccacctggcactggctgcctccatccaccag
agccagctggaccgcgaacgcatcctgagcttggagcagagggtggtagagctgcagcag
accctggctcaaaaagaccaggccctgggcaagctggagcagagcctgcgtctcatggag
gaggcctccttcgatggcaccttcctgtggaagatcaccaacgtcaccaggcgctgtcac
gagtcagcctgcggcaggaccgtcagcctcttctccccagctttctacacagccaagtac
ggctacaagttgtgcctgcgcctgtacctgaacggagacggcacaggcaagagaacccac
ctgtctctcttcattgtgatcatgagaggggagtacgacgctctgctgccgtggcccttc
cggaacaaggtcaccttcatgctgctcgaccagaacaaccgggaacatgcgattgatgcc
ttccggccggacctcagttcagcttccttccagaggccccagagcgaaacaaacgtggcc
agtggctgcccactcttcttccccctcaacaagctacagtcccccaagcatgcctatgtg
aaggacgacaccatgttcctcaagtgcatcgtggagaccagtacttag
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