Ornithinimicrobium sp. INDO-MA30-4: L0A91_00455
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Entry
L0A91_00455 CDS
T08946
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ord
Ornithinimicrobium sp. INDO-MA30-4
Pathway
ord03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ord00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L0A91_00455 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ord03021
]
L0A91_00455 (rho)
03019 Messenger RNA biogenesis [BR:
ord03019
]
L0A91_00455 (rho)
Transcription machinery [BR:
ord03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
L0A91_00455 (rho)
Messenger RNA biogenesis [BR:
ord03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
L0A91_00455 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
AAA_22
NACHT
ResIII
Motif
Other DBs
NCBI-ProteinID:
UJH71684
LinkDB
All DBs
Position
86870..88933
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AA seq
687 aa
AA seq
DB search
MRLAELQDLAGNMGLDVARGMRKADLVSAIRQARGGASSTHAPQLPSTNEQPAAAPAAEQ
EKSEVPKRPTRRSRRAGSAAGEPKGTASSEQNTADSAPEAKSPREGQAEEPTSSGQPTAD
VNDTKSGSNDEQAGSNNGDSRENQRRDNQRNKSRDNNRDNGGHDNGGLRNGRDNGSSEDR
SNDNRSGSNDSRDDNGRDNSSRDNRDSGRNNNRDNTRNDSGGRDNNNRDNNRDNGGRDNS
QSNAGQNNNSGQFDDDDDRNGRGRRRNRQRGRDRNKRPSGRNGGRNDYDDQDNSYSDEDV
LVPVAGVLDVLDSYGFIRTTGYLPGSTDIYVPMGMIRKNGMRKGDAVVGAIKATKDGEPI
NNGGNGRNSKFNALVRLDSVNGLEPDQAKARAEFGKLTPLYPQDRLRLETPDNKNLTTRI
IDLVAPIGKGQRGLIVAPAKAGKTMVMQSLANAITTNNPEVHLMVVLVDERPEEVTDMQR
AVNGEVIASTFDRPADDHTTVAELAIERAKRLVEMGGDVVVLLDSITRLGRAYNLSAPAS
GRILSGGVDSAALYPPKKFFGAARNIEHGGSLTILATALVETGSKMDEVIFEEFKGTGNM
ELKLDRQLANRRIFPAVDVNNSGTRREEILMSGEELKIMWKLRRVLAALDSQQSIELLLD
RLRKTRNNYEFLTQVQQTSSIKLDDEE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttgccgagttgcaggatctagccggcaacatgggcctcgacgtggcccgcggg
atgcgcaaggctgacctcgtctcagccattcgccaagcccgtggtggtgcatcaagcacc
cacgcacctcaactccccagcaccaacgagcagcctgcagcggccccggccgctgagcag
gaaaagtccgaggtgcccaagcgtccgactcgtcgctctcgtcgcgccggatctgctgca
ggtgagcccaaggggaccgccagtagcgagcagaacactgcagactcggcgcccgaggca
aagagcccccgtgaaggacaggccgaagagccgacctcgtcgggccagccaactgccgac
gtcaacgacaccaagtctgggtcgaacgacgagcaggccggtagcaacaacggtgactcg
cgagaaaaccagcgtcgggacaatcagcgcaacaaatcgcgcgacaacaaccgtgacaac
ggtggtcatgacaacggtggcctgcgcaatggtcgggacaacggctcaagcgaggaccgt
tcgaacgacaaccggtcgggcagcaatgacagccgagacgacaacggacgcgacaacagc
agtcgtgacaaccgtgactccggtcgcaataacaaccgcgacaacacccggaacgactcg
ggcggtcgcgacaacaacaaccgcgacaacaaccgtgacaacggcggtcgcgacaacagc
cagtccaacgcaggccagaacaacaactccggccagttcgacgacgatgatgaccgcaac
ggtcggggccgccgacgcaaccgccagcgtggtcgcgaccgcaacaagcgtccttcgggc
cgcaacggcggtcgcaacgactacgacgatcaggacaacagctattccgacgaggacgtg
cttgtcccggttgctggtgtgttggacgttcttgacagttatggcttcatccggaccacc
ggatacctgccgggttcgacggacatctacgtgccaatgggcatgatccgcaagaacggt
atgcgcaagggcgatgcagtcgttggtgccatcaaggccaccaaggacggcgagcccatc
aacaacggtggcaacggtcgcaacagcaagttcaacgccctggtgcgtctggacagcgtg
aatggccttgagccagaccaggccaaggcccgcgccgagttcggcaagttgactccgctg
tacccgcaggaccgtctgcggttggagactcccgacaacaagaacctcaccactcggatc
atcgacctggtggccccgattggtaagggccagcgtggcctcattgtcgccccggccaag
gccggtaagacgatggtcatgcagtccctggccaacgccatcaccacgaataaccccgag
gttcacctcatggttgtgctggtcgatgagcgtcccgaagaggtcaccgatatgcagcgt
gcagtcaacggtgaggtcatcgcctcaacgttcgaccgtcccgccgatgaccacacgacg
gtcgccgagttggcaattgagcgtgctaagcgcctcgtggagatgggcggcgatgttgtc
gtcttgctcgactcgataaccaggttgggccgcgcatacaacctttcggctccggccagc
ggtcggatcctctctggtggtgtcgactccgcagcgctctacccaccgaagaagttcttt
ggtgccgctcgcaacatcgagcacggtggatcgttgacgatcttggctacggctctggtc
gagactggctcgaagatggacgaggtcatcttcgaagagttcaagggcaccggcaacatg
gagctcaagctggaccgccagttggccaaccgtcggatcttcccggccgttgacgtcaac
aactcgggcactcgccgcgaagagatcctcatgtcgggcgaagagctcaagatcatgtgg
aagttgcgtcgtgtcttggccgccttggacagccaacagagcatcgagttgctgcttgac
cggctccgcaagactcgcaacaactacgagttcttgactcaggtgcagcaaacgtcctcg
atcaagttggacgacgaggagtaa
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