Ornithinimicrobium avium: DV701_03610
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Entry
DV701_03610 CDS
T05559
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
orn
Ornithinimicrobium avium
Brite
KEGG Orthology (KO) [BR:
orn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
orn03016
]
DV701_03610
Enzymes [BR:
orn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DV701_03610
Transfer RNA biogenesis [BR:
orn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DV701_03610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
YycC
Motif
Other DBs
NCBI-ProteinID:
AXH97892
UniProt:
A0A345NS84
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Position
757832..759082
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AA seq
416 aa
AA seq
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MPDLDPDPTSDFERVDVPSGGVPRVVDTERDLAEAMESLRGGSGPVAVDAERASGYRYGQ
RAYLVQLSRRGSGTWLVDPVPFADLAGLDEVLAPDEWVLHAATQDIPCLAEVGLRPRALF
DTELGARLAGLPRVGLSASLEYYLGVTLAKEHSAVDWSTRPLPEPWLRYAALDVELLVDL
RDRMERDLAEQGKLAWARQEFAALVDFRPRSADGEDWRRTSGMHRVRRPRNLAALRELWH
ARDAIAQERDVAPSRIVPDSTLVDLATRMPLHPSGLASERPDRSRSRQRRAEQGLQRYQR
TWLDAVRRAAELPEEELPAPSPRSEGPPPARAWAERDPAAAQRLSMARAELATLSERVDV
PVENLMTPEHVRKVLWRPPSTVSARTVDEAFAALGARPWQRELVVPLVVAALQEHP
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacctcgaccccgaccccacctccgacttcgagcgcgtcgacgtcccctccggg
ggcgtgccgcgcgtggtggacaccgagcgggacctggccgaggcgatggagtcgctgcgg
ggcgggagcgggccggtggcggtcgacgccgagcgcgcgtccgggtaccgctacggccag
cgcgcctacctcgtccagctgagccggcggggctcgggcacctggctggtcgacccggtg
cccttcgccgacctcgcggggctcgacgaggtcctggcccccgacgagtgggtcctgcac
gccgccacccaggacatcccctgcctggcggaggtcggtctgcgcccgcgcgccctcttc
gacaccgagctgggagcacgtctggccggtctgccccgcgtggggctgtccgcctccctc
gagtactacctcggcgtcacgctcgccaaggagcactcggcggtcgactggtcgacccgg
ccgctgcccgaaccctggctgcgctacgccgccctcgacgtcgagctgctcgtcgacctg
cgcgaccggatggagcgcgacctggccgagcagggcaagctcgcgtgggcccgccaggag
ttcgccgccctggtcgacttccgaccgcgctccgccgacggcgaggactggcggcgcacc
tccgggatgcaccgggtgcgcaggccacgcaacctggccgcgctgcgcgagctctggcac
gcccgcgacgccatcgcccaggagcgcgacgtcgcccccagccgcatcgtcccggacagc
actctcgtcgacctcgccaccaggatgccgctccacccctccggactggcgtcggagcgg
cccgaccggtcccgctcgcgccagcggcgggccgagcagggcctgcagcgctaccagcgc
acctggctcgacgcggtccgccgggccgccgagctgcccgaggaggagctgcccgcaccc
tcgccgcggagcgagggaccgccgccggcccgggcgtgggccgagcgcgacccggccgcc
gcccagcggctgagcatggcccgcgccgagctggccaccctctccgagcgcgtggacgtg
ccggtggagaacctgatgacccccgagcacgtgcgcaaggtgctgtggcgcccgccgtcg
acggtgagcgcccggacggtggacgaggccttcgccgcgctcggcgcccgcccgtggcag
cgcgagctggtcgtcccgctggtcgtcgcggcgctccaggaacacccctga
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