Ornithinimicrobium avium: DV701_08345
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Entry
DV701_08345 CDS
T05559
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
orn
Ornithinimicrobium avium
Pathway
orn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
orn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DV701_08345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
orn03021
]
DV701_08345
03019 Messenger RNA biogenesis [BR:
orn03019
]
DV701_08345
Transcription machinery [BR:
orn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DV701_08345
Messenger RNA biogenesis [BR:
orn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DV701_08345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
SAP
HeH
MSA-2c
Motif
Other DBs
NCBI-ProteinID:
AXH96138
UniProt:
A0A345NM80
LinkDB
All DBs
Position
complement(1837430..1839661)
Genome browser
AA seq
743 aa
AA seq
DB search
MRWTTTREPRAPDERPAEGEGQYVTDITEAAATKTGALSTLRLAELQQLASSMGISVNAK
MRKADLVSAIREQQRGGRGAASVAGKNGAQAASRPAAAATAEKPAAEKPADKPADKPAAE
KPADKPAAEKPADKPAAEKPADEQSRQQTRAESAGETREETGQTGGEGGAAALEAALDRA
QAERESGRTRRSRRAGSGAGAPRAVEGRSEQGGQQQGRGDQQGQHGDQQRRQQGDRQQDR
QQNQGDRQQGDRQQERQQNQGGGQQQDRQQNQGGGQQQDRQQNQGGGQQQDRQQGQDGQQ
QGGYDDEEGGGRRRRSRQRGRDRKRGRTGPGVQGQQGGQQREDEETYTDEDVLVPVGGVL
DVLDNYAFIRTTGYLPGPTDIYVPLNIVRRYGLRKGDAVQGAIKAPAEGQDNQHTISSTG
HKRDRGKFSALVRLDAINGRTPEESRTRPEFGKLTPLYPQDRLRLETDQKNLTTRVIDLV
APIGKGQRGLLVAPAKAGKTLILQAIANAITANNPECHLMVVLVDERPEEVTDMERAVKG
EVISSTFDRPAEDHTTVAELAIERAKRLVELGGDVVVLLDSITRLGRAYNLAAPASGRIL
SGGVDSAALYPPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFEEFKGTGNMELKL
DRQLANRRIFPAVDVNASGTRREEILMGSEELKVMWKLRRVLAALDQQQALELLLDRLRK
TKHNYEFLTQVQQTSSIRLDDED
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
gtgcgctggaccaccacccgagaaccccgtgcaccggacgagcgtccggcggagggggaa
ggacagtacgtgaccgacatcaccgaggctgcagcgaccaagaccggcgcgctcagcaca
cttcgtctggccgagctccagcagctcgcctccagcatgggcatcagcgtcaacgccaag
atgcgcaaggccgacctagtctcggccatccgtgagcagcagcgcgggggccgcggagcc
gccagcgtggccggcaagaacggcgcgcaggccgccagccggcccgctgccgcggcgacg
gctgagaagccggccgctgagaagccggccgacaagccggccgacaagccggccgctgag
aagccggccgacaagccggccgctgagaagcccgccgacaagccggccgctgagaagccc
gccgacgagcagtcccgccagcagactcgtgcggagtccgcaggcgagactcgcgaggag
actggtcagaccggtggcgagggcggcgccgccgccctcgaggcggcgctggaccgcgcc
caggccgagcgggagtcgggtcgcacccggcgctcgcgccgcgccggctccggtgccggt
gctccgcgtgcggtggagggccgctccgagcagggtggccagcagcagggccgtggcgac
cagcagggccagcacggtgaccagcagcgccgtcagcagggcgaccgtcagcaggaccgt
cagcagaaccagggcgaccgccagcagggcgaccgtcagcaggagcgtcagcagaaccag
ggcggcggccagcagcaggaccgtcagcagaaccagggcggcggccagcagcaggaccgt
cagcagaaccagggcggcggccagcagcaggaccgtcagcagggccaggacggccagcag
cagggtggctacgacgacgaggagggcggcggccgccgtcgccgcagccgtcagcggggc
cgggaccgcaagcgcggccgcaccggtccgggcgtccagggccagcagggcgggcagcag
cgtgaggacgaggagacctacaccgacgaggacgtgctcgtccccgtcggcggcgtcctc
gacgtcctcgacaactacgccttcatccgcaccaccggctacctgccggggccgacggac
atctacgtgccgctcaacatcgtgcgccgctacggcctgcgcaagggcgacgcggtccag
ggcgccatcaaggcgccggccgaggggcaggacaaccagcacaccatctcctcgaccggg
cacaagcgcgaccggggcaagttcagcgccctcgtccggctggacgccatcaacggccgc
acgcccgaggagtcccgcacgcgtcccgagttcggcaagctcacgccgctctacccgcag
gaccgcctgcgcctggagaccgaccagaagaacctcaccacgcgggtcatcgacctggtc
gccccgatcggcaagggccagcgcggcctgctcgtcgccccggccaaggccggcaagacg
ctgatcctgcaggcgatcgccaacgcgatcacggccaacaacccggagtgccacctcatg
gtcgtcctcgtcgacgagcgtcccgaggaggtcaccgacatggagcgagcggtcaagggc
gaggtcatctcctccaccttcgaccgcccggccgaggaccacaccacggtcgccgagctg
gcgatcgagcgcgccaagcgcctcgtcgagctcggcggcgacgtcgtcgtgctcctcgac
tcgatcacccgcctgggccgcgcctacaacctggcggccccggcctccggccggatcctc
tccggtggtgtcgactccgcggcgctctacccgcccaagcggttcttcggcgcagcccgc
aacatcgagaacggcggctcgctgaccatcctggcgaccgctctggtggagaccggctcc
aagatggacgaggtcatcttcgaggagttcaagggcaccggcaacatggagctcaagctg
gaccgccagctggccaaccgccgcatcttcccggccgtggacgtcaacgcctccggcacc
cgccgcgaggagatcctgatgggctccgaggagctcaaggtcatgtggaagctgcgccgg
gtgctcgccgcgctcgaccagcagcaggcactcgagctgctcctggaccggctgcgcaag
accaagcacaactacgagttcctcacccaggtccagcagacctcctcgatcaggctggac
gacgaggactga
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