Odobenus rosmarus divergens (Pacific walrus): 101362747
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Entry
101362747 CDS
T05148
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
101362747 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oro04121
]
101362747 (SLX4)
03400 DNA repair and recombination proteins [BR:
oro03400
]
101362747 (SLX4)
Ubiquitin system [BR:
oro04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
101362747 (SLX4)
DNA repair and recombination proteins [BR:
oro03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
101362747 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
BTB
zf-C2H2_4
YlbE
Motif
Other DBs
NCBI-GeneID:
101362747
NCBI-ProteinID:
XP_012418796
LinkDB
All DBs
Position
Unknown
AA seq
1757 aa
AA seq
DB search
MMDESDDDFKELCASFLQRVKKNVTKEVSGERKTQKASNSTQISKPKRTKPTATKGKTLQ
GPREKKTQSGSQAPRTKKQGAPKWQRSEPTPPENGEGNVLASAVRQEGVQSTQTETAPDS
NCQPPPSCLTVTAPSPSKARTAELVLQRMQQFKRADPKRLQHASEGSSLEATLEEKAPEG
PPEEMTAGNGSGPGLPGTESDAAVALALQQEFGQQRAPTREANLEETGLFFCQICHKNLS
AMNVTRREQHVNRCLDEAEKALTPTTPRIPECPICGKPFLSPKSRISHLKQCAVKMDVGP
QLLLQAVRLQTAQPDGACGTLASSFSSHVGGLKRKGATNRKELQKKRKVNEPEDLLVAMA
LSRSEMEREAVPTVLRLESAFPERIRLGAEKKSRKRKAPLCPPPLLVQDPETTQRQTEDR
VAQLFAEEMELSSTPPLPVSRMVKEELEKASRQLKQNFLWEGSALTGAWALEAFYTTSLV
PPMVPQPPAKGLTQEPTLPPVLPDEPELGVRTPPALPGAPPAGHGPGNPSPSASQREHQA
LQDLVDLAGEGLSATPWPCSGGLASSEGAAGMDVSPPGLRPTGFVLPPKEKPLERDSQAS
LTLSLLLADFRAMVNNPHLSDVQLQTDSGDVLYAHQFVLYARCPLLMQYVNSEGFFAVEN
GDLRSQRVLLSDVSTEAARALLHYLYTADPGVPPRLAPGLSALAHRFGISELVLLCEQAP
DVSDSEDRPWKEKEDEECESRAENFQELLRSMWIDEEEEAEALLKSESHEEDREKVNEAE
MEEIYEFAATQRKLLRGEGATEIKEETDQFGDDGPASVQILASGQVSQQPENAEQMESSG
EGKEEAPATWKSVRQSMPLPLKGQCADEEKAGSPEEALGRSGSPHPSGGCKAGRKGGVFW
CSADAPEARPFSSTPRKCRGLSQITSHLREVNGSISGKRAGSPSTPARWQTPLWRPCLSQ
SPGGQRPGRPHPHPHLWGESPSPGPQPQGRASRGAAQDSPAKQRRGRSLLTLLKDPGLQK
DKEHGSSLECRNKGVLVSPEKSPSIDLTQSKPGHLSSRSQNTLSSKNREDEIILLLDSDE
ELELEQTKIKSVFNGPLEERKVLEVSPKSSELFSVIDVDADQEPFQSPARREASLQGREE
GPAGNRGSVGGRGAPWLSCHPESGPEEDSTTDTSWLVPATPLASGSRDSSSQTQITGLKS
RASVDHVAQVKPWAPLENRGGPEATSKFPVITPQMSSSCLVPVRLGSPDSRSPSRPHPGH
HQHCSLAPCPVSGGPGVLSGQPQKCLRPRPSLLSQAITSEVVEVEDSEDEQEAASRQASS
SPLLDGDPPIPLDGCHWHVEPLSPIPIDRLNVERTGPLSTSGLGSRAGEAPDCHRCCSPT
LQGTAPAPGSRAGRTESQEKAHRAGSPGSSRPSFLNSAVWDDWDGEEQKSPELLPPAQRL
SANVVALNSEGLETPKGANRKNLPPKVPITPMPRYSIMETPVLKKELERFGVRRLPKRQM
VLKLKEIFQYTHQTLESDSENESQSSQVLLEAPHSQTHASRTSKASRAVGHAWLEATSGP
LPQRSKESTKTRGPRQQKKQPGGSIPPMSMSQANEEPPDPDGDAQLPASQESVASSVDSS
DSSFSSQSSSCEFGVAFESAEDEEGEEELSASQAAVHAAATEEAVRRYIRSRPALYRKVL
LYQPFELAELQAELKQHGIHVATAKLLDFLDAHCITFTTAAARKEKLHRKRRQPVGKKRG
RAARPVRPSPPLSVSSL
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgagtcagatgatgattttaaggaactctgcgccagctttctccaaagggtg
aaaaagaatgtcaccaaggaagtgtcgggggaaaggaagacacaaaaggcctccaacagc
actcagataagcaaaccaaaaaggaccaaaccaactgctaccaaaggcaaaacccttcaa
ggccccagggagaagaaaactcagtctggcagccaggccccgaggactaaaaagcaaggg
gcacccaagtggcagaggagtgaacccaccccccctgagaatggagagggaaatgtgctt
gcctctgctgtgcgccaggagggtgtgcagagcacccagacagagactgctccagacagc
aactgccagccccctccttcctgtctgacagtgacagcaccaagtccctccaaagcccgg
acggcagagttggtcctacaacgaatgcagcagttcaagagagcagaccccaagcgtttg
cagcatgcttcggaagggagctctctggaggctacacttgaagaaaaggccccagagggc
cctccagaggagatgacagcagggaatgggtctgggcccgggcttcctggcacagagagc
gacgctgcagtggccttggctctgcagcaggagtttgggcagcagcgagcacccacacgc
gaggctaacctggaggagacggggttgttcttctgtcagatctgtcacaagaacctctca
gccatgaacgtgacacgaagggagcagcacgtgaaccggtgcttggatgaggctgaaaag
gcactgacacccaccacacctcggatccccgaatgcccaatttgtggcaagccctttctc
agcccaaagagcagaatcagccatctgaaacagtgtgcagtgaagatggatgttggcccc
cagctcctgctccaggctgtgcggctgcagacagctcagcctgacggggcctgtggcaca
ctggcatcgagcttcagcagtcatgttggaggtctgaagcggaagggagccaccaacagg
aaggagctgcagaagaagcggaaggtcaatgagcccgaggacctgctggtggccatggct
ctgtcccggtccgagatggagcgggaggctgtgcccacggtgctcagactagaaagcgct
ttccctgagaggataagactgggggcagaaaagaagagtcgtaagaggaaagcaccttta
tgccctcccccgttgttagtccaggacccagagaccacacagaggcagacagaggaccga
gtagcccagctcttcgcggaggagatggagctgtccagcacgccgccacttcctgtgagc
aggatggtaaaggaagagctggaaaaggccagccggcaactgaagcagaactttctgtgg
gagggcagcgccctgactggggcctgggctctggaagccttctacaccacaagcctggtc
cctcccatggtgccccagccgcccgccaagggtcttacccaggagcccacgctgccgcca
gtgctgcctgacgagccagagctgggtgtgcgaacgccacctgctctccccggtgccccg
cctgcgggccatggccccgggaacccctcaccctctgccagccagagagagcatcaggcc
ctgcaggaccttgtggacctggcaggagaggggctgagtgccaccccgtggccctgcagt
gggggcctggccagctcagaaggggccgcagggatggatgtgtcaccccctggccttcga
cccactgggtttgtcctgccacctaaggaaaagcccctggagagggatagccaggcttcg
ctcaccctcagtttgctgctggccgacttcagagccatggttaacaacccacacctgagt
gacgtccagctgcagacggacagcggggacgtgctttacgcccaccagttcgtgctttat
gcccgatgcccccttctcatgcaatatgtgaacagcgagggcttcttcgccgtggagaat
ggcgatctgcggagccagcgtgtgctgctgagtgacgtgagcaccgaggctgcccgggcg
ctcctgcactacctgtacaccgcggaccccggtgtgcccccccggctggcccctggcctg
agcgctctggcccacaggtttggtattagtgagcttgttcttctgtgcgaacaagcccct
gacgtgagcgattcagaggacagaccgtggaaggagaaggaagatgaggaatgtgaaagc
cgcgcggagaacttccaagaactcttgaggtccatgtggatagatgaagaggaagaagca
gaggctttgttgaaatctgagagccatgaagaagacagagaaaaagtgaatgaagcagaa
atggaagaaatttatgaatttgcagccactcagcgaaagctgctccggggggaaggagct
acagagataaaggaagaaactgaccagttcggggatgatggtccagcatctgtgcaaatc
ttagcgagtggccaagttagtcaacagccagaaaatgcagaacagatggaatcatctggt
gagggaaaagaagaggccccagccacatggaaaagcgtgagacagtccatgcccctgcca
ctcaagggccagtgtgcggatgaggagaaagcagggtccccagaggaagcactgggtcgt
tccggctcccctcacccttctgggggctgcaaggcagggagaaagggaggcgtgttttgg
tgctcagcagatgctcctgaggcccggccattttcatcaactcccagaaaatgccgtgga
ctgtcccagataacgagccatctccgggaagtcaacggcagcatctcgggaaagagggcg
gggagcccctctacccctgctcgctggcagacacccctgtggcgcccatgcctgtcacag
tctcctgggggccagaggcccggccggccacaccctcatcctcatctttggggtgagtcg
ccctcaccagggccccagccgcagggcagagcttccaggggggctgcccaggactcccca
gcaaagcagaggaggggcaggagcctcctcacgttacttaaagatccaggcctccagaag
gacaaagaacatggttcctcattggaatgcagaaataaaggggttctggtctccccagaa
aagtctccatccatcgacctaacccagtcaaaacctggccacttgagctccagatctcag
aatactctatccagcaagaacagagaagatgagattatccttttattggattcagatgaa
gagctagagctagaacaaaccaaaataaagtccgttttcaatggtcccctggaagaaagg
aaagttctagaagttagccccaagtcttctgaactgttttctgtcatcgacgtcgatgca
gatcaagaacctttccaaagcccagcaagaagagaggcttccctgcagggcagggaggag
gggccggcagggaaccggggctctgtggggggcagaggggccccctggctgtcgtgtcac
cccgagagtggccccgaggaagacagcaccacggatacctcatggctcgtgcccgccacg
ccactggccagtggaagccgggactcttcctcacagacgcagataacaggcctcaagtcc
agggcttcggtggatcacgtggctcaggtcaagccctgggccccgttagaaaacaggggt
ggccccgaagccacaagtaagtttccggtcatcacaccccagatgtcgtcgtcatgcctg
gtccccgtccgtctaggcagccctgacagcaggagcccttccaggccccaccctgggcac
caccagcactgctccctggctccctgtcccgtctctggcggccccggtgttctcagcggg
cagccccagaagtgcttacgccccaggccgagcctactgagccaggccatcaccagtgag
gtggtggaggtggaagacagcgaagacgagcaggaggcggcctcccgtcaggcgagcagc
agccccctgctggacggcgaccctccgattccccttgacggttgccactggcacgtggag
cccctctccccaattcccattgaccgcctgaacgtcgagcggaccggccccctgagcacc
agcggtctgggcagtagggccggggaggccccagactgccacaggtgctgctctcccacc
ctccagggcaccgcccccgccccaggaagccgcgccggccgcacagagtctcaagagaag
gcccatcgggccggctcgcctgggagcagcaggccgagctttttgaactctgctgtgtgg
gacgattgggatggagaggaacagaagtctccagagctccttcctccagcccagaggctg
agtgctaatgtcgtcgctctgaactcagaagggctggagacgccaaaaggtgctaatcgg
aagaacttgcccccgaaagtgcccataacgcccatgccaaggtattccatcatggagact
ccggtactgaagaaagaactggagaggtttggggtccgccgtctacccaaacgccagatg
gtcctaaaactgaaggagatattccagtacactcaccagactctggagtccgactcggag
aatgaaagccagtcctcacaggtgctcctggaggctccacacagccagacccacgccagc
aggacctccaaggcttccagggccgttggccatgcctggctggaggccacttctggccct
cttccccaaaggtccaaggagtccactaagaccaggggcccccgacagcaaaagaaacag
cctggtggaagcatccctccgatgagcatgtcacaggccaacgaggagcctccagaccct
gatggggacgcccagctcccggcatcccaggaatcggtggcctcctctgtggacagcagt
gacagctcctttagctcacaaagttcttcctgtgagtttggagtggcctttgagtctgca
gaggatgaagagggtgaagaggagcttagcgcatcccaggcggcggtgcacgcggcagcc
acagaggaggccgtgaggcgctacatccgctccaggccggccctctaccgcaaggtcctg
ctgtaccagccctttgagctggcagagctgcaggccgagctgaagcagcacggcatccac
gtggccacggcgaagctgctggacttcctggatgcccactgcatcaccttcaccaccgct
gcggcccggaaggagaagctccaccggaagagacggcagcctgtgggcaagaagcggggc
cgagccgccaggccggtccgcccctccccacccctgtccgtcagcagcctgtga
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integrated database retrieval system
