Odobenus rosmarus divergens (Pacific walrus): 101366498
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Entry
101366498 CDS
T05148
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03013
Nucleocytoplasmic transport
oro03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101366498 (UPF3B)
03015 mRNA surveillance pathway
101366498 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oro03019
]
101366498 (UPF3B)
Messenger RNA biogenesis [BR:
oro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101366498 (UPF3B)
mRNA cycle factors
P-body specific factors
101366498 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
101366498
NCBI-ProteinID:
XP_004405269
UniProt:
A0A2U3WA91
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MKEEKEHRPKEKRVTLLTPPGATGSGGGASGDSTKGEDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYAADNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIDRVPERDKLKDEPKIKVHRFLLQAVNQKNLLKKPEKGDEKELDKREK
AKKLDKENLNDERASGQSCTLPKRSDGEPKDEKPKRPEEESARDHRERERERDYERERDR
DPERVLRERERLKRQEEERRRQKERYEKEKAFKRKEEELKKEKEAVRDKGKKTESTEAVG
GSEKTEKKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPPDDSTKSGDSAIEKKQESGI
SHRKEGGEE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggagaaggagcataggcctaaggagaagcgagtaaccctgttgactcccccg
ggggccacaggcagcggcggtggggcttcgggggacagcaccaaaggggaagataagcag
gatcgaaataaggagaagaaagaggcgctgagcaaggtggtaattcggagattacctccc
actttgaccaaggagcagcttcaggaacatcttcagcctatgccggagcatgattatttt
gagtttttttctaatgatactagtctgtatcctcatatgtatgccagagcatacatcaac
tttaaaaaccaagaggacattattttgttcagggatcgctttgatggttatgtattcctt
gacaataaaggtcaggaatatcctgctatagtagaatttgcaccttttcaaaaagctgca
aaaaagaagactaagaaaagagataccaaagttgggactatcgatgatgatccagaatat
agaaaatttttggaaagttatgctgcagataatgagaaaatgacatctactccagagaca
ctgctagaggaaatagaagcaaaaaatagagaattaatagctaaaaagacaaccccactt
ttgagcttcctgaaaaacaagcagagaatgagagaagaaaaaagagaagaaagaaggaga
cgagaaatagaaaggaaaagacaaagggaagaagagaggaggaaatggaaagaagaagaa
aaacgaaaaaggaaagatatagaaaagctaaagaagatagaccgagttccagaaagggac
aaattaaaggatgaaccaaagattaaggtacacaggtttctgttacaagctgtgaatcag
aaaaatctactcaagaagccagaaaagggagatgaaaaagaattagataaaagagaaaaa
gccaagaaactggacaaagagaatctgaatgatgaaagagccagtgggcagagttgtaca
ctgcccaagcgctctgatggcgaacctaaagatgaaaagcctaagaggcccgaagaggag
agtgccagagaccacagggagcgggagcgggagcgggactacgagcgagagcgagaccga
gacccggagcgcgtcctgcgggagagggagaggctgaagcggcaggaagaggagcgccgt
aggcagaaggagcgctacgagaaggagaaagcttttaaaaggaaggaggaagagctgaag
aaagagaaagaagcggtccgggataaaggaaagaagacggaaagtacagaagcagtaggc
ggctccgaaaaaactgaaaagaaagaggaagtggttaagagagatcgcataagaaacaag
gatcgcccagcaatgcagctttaccaaccaggagctcgaagccgaaatcgactctgtccg
cctgatgacagcaccaagtctggagattcagcaatagaaaaaaagcaggaaagtggtatt
agccatagaaaagaaggaggagaggagtga
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