Odobenus rosmarus divergens (Pacific walrus): 101385430
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Entry
101385430 CDS
T05148
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03013
Nucleocytoplasmic transport
oro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101385430 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
101385430 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oro03019
]
101385430 (THOC1)
03041 Spliceosome [BR:
oro03041
]
101385430 (THOC1)
Messenger RNA biogenesis [BR:
oro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
101385430 (THOC1)
Spliceosome [BR:
oro03041
]
Complex C
Other components
EJC/TREX
101385430 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101385430 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
101385430
NCBI-ProteinID:
XP_004411263
UniProt:
A0A2U3WQ82
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLSTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRVARKRTAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFASKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLMNALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttgcctgaagcgcggacgcggtttacgaagtct
accagagaggccctgaacaacaaaaatatcaagccattgttgagtaccttcagccaatta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtgttctagaa
gaagaaattataaatcactcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtaccgcatctacaccttttgtattgttgggagatgtt
ttggattgtcttcctttggatcaatgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaacacattctattctgctgggaaaaattatttactacgtatgtgc
aatgatctcttgagaagattatcaaaatcccagaatacagtcttctgtggacgaattcaa
ctcttcttggccaggcttttccctttatctgagaaatcaggtcttaacttgcagagtcaa
tttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagcaccttgggtcag
aagcacactgaggatagagaagaaggaatggatgtagaagaaggtgaaatgggagatgat
gaagctccaacaacttgctccattccgattgattacaacctgtatcgaaaattctggtca
cttcaggattacttcaggaaccctgtgcaatgctatgagaagatttcatggaaaactttt
cttaagtattctgaagaagttctagctgtttttaagagttataaattagatgatactcag
gcctccaggaaaaagatggaagaattaaaaacaggaggagaacatgtatattttgcaaaa
tttttaacaagtgaaaagttgatggatttacaactgagtgacagtaactttcgtcgacac
atcttgttgcagtatctcattttattccagtatcttaaggggcaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtt
tatcaactactatctgaaaacccccccgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagaacatcagacaccaagccgacaagagtagctcgcaagagaacagcaccagag
gacttcctagggaaaggacccaacaaaaagattctgatgggaaatgaggagttgacaagg
ctttggaatctctgtcctgataatatggaagcttgcaaatcagagacaagggaatacatg
ccaactttagaggaattctttgaggaagccattgaacaggcagaccctgaaaacatggtt
gaaaatgaatacaaggctgtgaacaattccaattatggttggagagccctgagactgtta
gcacggagaagccctcacttcttccagccaaccaaccagcaatttaaaagtttgccagaa
tatctcgaaaacatggtaataaagctagcaaaggaattaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagc
cctgatgttcgccgagacaaacctgtaacaggggaacaaatagaggtgtttgccagtaaa
ctgggtgagcaatggaagatcctggctccctatttggaaatgaaagactcggaaattaga
caaattgagtgtgacagcgaagacatgaagatgagagctaagcagctactggtcgcctgg
caagatcaagagggagtacatgcaacacctgagaatctgatgaacgcactgaataagtcc
ggattaagtgaccttgcagaaagtctaactaatgacaatgagacaaatagttag
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integrated database retrieval system
