Oryza sativa japonica (Japanese rice) (RefSeq): 4326829
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Entry
4326829 CDS
T01015
Name
(RefSeq) autophagy-related protein 18a
KO
K22991
WD repeat-containing protein 45
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4326829
Membrane trafficking [BR:
osa04131
]
Autophagy
Other autophagy associated proteins
Others
4326829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
ANAPC4_WD40
CPSF_A
BCAS3_WD40
Ge1_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
4326829
NCBI-ProteinID:
XP_015621196
UniProt:
Q8LR61
Q0JGA7
LinkDB
All DBs
Position
1:complement(40966690..40971151)
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AA seq
457 aa
AA seq
DB search
MATPPHDASPAPPNPNPVSDDPPPPPPVTETKPEPEPPLPTTSIDPTPSGDEESGDDSSS
SVSSASSTSPTAAAAAAAAGGGGGGGGERAAPHPAAKDLLHISFNQDYGCFAAGTKSGFR
IYNCDPFREIFRRDLGAAGDNGVGGGGGGIGVVEMLFRCNILALVGGGDAPHYPPNKVMI
WDDHQSRCIGELSFRSPVRGVRLRRDRIIVVLENKIFVYNFADLKLVHQIETAPNPKGLC
AVSQQPGSIVLVCPGAQKGQVRVEHYGARKTKFINAHTSRVACFALSQDGRLIATASTKG
TLVRIYNAAEGNLLQEVRRGADRAEIYSLAFSNNLQYLAVSSDKGTIHVFNLKINVGLTT
NDKPLPAPDPDVPHISPSLSFIKGVLPKYFHSEWSVAQFRLHEGEQYIVAFGHEKNTVAV
VGMDGSFYRCQFDPVNGGEMLQLECYNFLKPSSDQPQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccgccgcacgacgcctcgccggccccaccaaaccctaaccccgtctccgac
gaccccccgccgccgccgccggtgacggagacgaagccggagccggagccgcctctcccc
accacctcgatcgaccccaccccgtctggcgacgaggagagcggcgatgactcctcgtct
tctgtctcatccgcctcgtctacttcgcccacggccgccgcggctgctgctgctgcggga
ggtggaggtggaggtggaggcgagagggcggctccccacccggcggcgaaggatctcctc
catatctccttcaaccaggactacggctgcttcgcggcggggaccaagtcgggcttccgc
atctacaactgcgatccattccgcgagatcttccgccgggacctcggggccgcgggggac
aacggcgtcggcggtggaggaggaggaatcggcgtcgtggagatgctgttccggtgtaac
atactggccctcgtcggcggcggagacgcccctcactacccgcctaacaaggtgatgatc
tgggacgaccaccagagccggtgtatcggggagctctccttccgctcccccgtgcgcggt
gtccgcctccgccgcgatcgcatcatcgtggtgctagagaacaaaatcttcgtctacaat
ttcgcggacctgaagcttgttcaccagatcgagacggcgcctaacccgaagggcctctgc
gcggtttcgcagcagcccggatcgattgtgctggtttgccctggtgcacagaaagggcag
gttagagtggagcactatggtgccaggaagaccaaattcatcaatgcgcatacttcccgt
gtcgcgtgctttgcattatcacaggatgggaggctcattgctactgccagcaccaagggg
acacttgttagaatctacaatgctgccgagggcaatctcctgcaggaagtacggagaggt
gctgatagagcagaaatatatagcttggcgttctccaacaatttgcaatatttggctgta
tcaagtgataaaggaacaatacatgtgttcaatctaaagataaatgttggattaaccacg
aatgataagcccctgcctgctccagatcctgatgttccacatatcagtccatctctttct
ttcattaagggtgtactaccaaaatatttccactcggagtggtctgtagctcagttcaga
ctccacgagggggagcaatatattgttgcatttggccatgagaagaataccgtggcagtt
gttggcatggatggaagcttctaccgatgccagttcgaccctgtaaacggaggagagatg
ctgcagctggagtgctacaatttcctaaaaccatcatcggatcaaccacagtag
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