Oryza sativa japonica (Japanese rice): 4327680
Help
Entry
4327680 CDS
T01015
Name
(RefSeq) single myb histone 4 isoform X1
KO
K09422
transcription factor MYB, plant
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4327680
Transcription factors [BR:
osa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
4327680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Linker_histone
Myb_DNA-bind_6
DUF6908
SAMD1_WH
Glyco_hydro_9
Motif
Other DBs
NCBI-GeneID:
4327680
NCBI-ProteinID:
XP_015622156
LinkDB
All DBs
Position
1:join(29993991..29994140,29996733..29996932,29997418..29997502,29998050..29998133,29998865..29999159,29999240..29999346)
Genome browser
AA seq
306 aa
AA seq
DB search
MGAPKQKWTSEEEEALRRGVLKHGPGKWRTIQKDPEFSPVLSSRSNIDLKDKWRNLSFSA
SGLGSRDKLKVPRIKGPSSSTSPSSQTPLLVLPPNKVAEASPSADPEKSSQDVKIPKYSS
MVIEALCEIGDPNGSDVDAICHYIEQRHEVQANFRRLLTAKLRRLIAAKKIEKIDRSYRI
TESYAAKVSQANKSPSPKKDPAKPLKASQNLGSFAGTSPALEAAAAAAMKVADAEAKSHL
ANEHMTEAERIFKLAEETESLVTLATEIYERCSRGEILTIMQVAQSNFEFQSVSGNGSGT
GSTVLA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccccgaagcagaagtggacctcggaggaggaggaggcgctgcggcgcggcgtg
ctcaagcatggccccggcaagtggcgcaccatccagaaggatccggagttcagccccgtc
ctctcctcccgctcgaacatcgacctcaaggacaaatggaggaatttgagttttagtgca
agtggactgggttcaagggataaattaaaggttccaaggataaaagggccttcatcttcc
acatctccaagctctcagactccgcttctcgtcctacccccaaataaagttgctgaggct
tcaccatccgcagatcctgagaaaagctctcaggatgtgaagattccaaagtacagttcc
atggtaatagaagctctttgtgaaattggggatccaaatggttcggatgttgatgcaatt
tgccactacatagagcaaaggcacgaggtgcaagcgaattttagaagattgcttactgca
aaattaaggaggcttatagcagcgaaaaagattgaaaagattgacaggtcctataggatc
acagaatcttatgcagccaaagtttcgcaagcaaataagtctccaagtccaaagaaggat
ccagccaagccactgaaggcatcgcagaatttaggttcatttgctggtacgagtcctgcc
ctagaagcagctgcagctgcagctatgaaagtggctgatgcggaggccaaatcacacctt
gcgaatgagcacatgacggaggctgaaaggatcttcaagcttgctgaggagaccgagtct
ctcgttacactcgcaacagagatctatgaacgatgttcaagaggagagatattaacaata
atgcaagtggcgcaaagcaattttgaattccaatctgttagcggcaacggcagcggcact
ggttctactgtacttgcatag
DBGET
integrated database retrieval system
