Oryza sativa japonica (Japanese rice) (RefSeq): 4330388
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Entry
4330388 CDS
T01015
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 21 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
osa01002
]
4330388
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4330388
Enzymes [BR:
osa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
4330388
Peptidases and inhibitors [BR:
osa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
4330388
Ubiquitin system [BR:
osa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
4330388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
4330388
NCBI-ProteinID:
XP_015626091
LinkDB
All DBs
Position
2:28472505..28478295
Genome browser
AA seq
706 aa
AA seq
DB search
MADQNGAAAVSEAEAAPVQVETGAESGDAESEQYQPFFSMCQPIRSVSYSNSWDMVCAPT
IKSNEHNSNLDSMDDKYMLSAPWPENEQPQSENDMDLLDGDTNMQSEPLSTEQPSSNDEI
DIWDGKTKQDSSSLLDSKLCNSGSGAEPCNMEGQQFSLSFSRNTQSQLVGSGLGNMGNTC
FLNSILQCVTHTVPLFLRLRSTDHCAPCSYDKDGFCSFCALKEHIDESIRRSGSVIRPVR
FRDNLRKLSSDFRPGQQEDAHEFLRCLLDNLDKCTTDPKPKDKPSSFDEESIVKQVFGGR
LKSKLTCCECGHCSETYEPFLDLSLEIDQADNLIDALESFTKLERIGDAEDKLNCEHCNA
KVCKNKQLMLDRSPDVVAIHLKRFTSLDRSVEKIDKHVVYPLELDLKPFHCDPDINKELK
YDLYGVVEHSGSPSYGHYVCSVRSSPSTWHLMNDSHVDLISEASALNQEGYILFYIRQGK
FQWFSSLLEQKDDLHPENTSGASPVSVLENIDVDCPTSSGEATNSSGDKLEKDETSQCKT
SFLEEPAKGCPIDGINKADLKDEIVPCISSHHDCVANRCPGSAADITNLDRPSTPSPKRK
RFFSDDNEFNVFEFEDFGDEDETPLLGNLKFTSKAKKAKVESASKSTKGPCIDKNVTRLV
RSMPSTRRKGIVDCLSQLNAEQDSGSCPRSHPLGKKKLGIPVPIKW
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccagaacggcgccgcggccgtgagcgaagcggaggccgcccctgttcaggtt
gaaactggtgctgaaagtggggatgctgaaagtgagcagtaccaaccatttttctccatg
tgccagccgattcgctctgttagctattcaaattcctgggatatggtttgtgcccccaca
attaagagtaacgaacacaatagcaacttggattcgatggatgataaatacatgctgagt
gcaccttggcctgaaaatgagcagccccagtctgagaatgacatggatttgttagatggg
gatacaaatatgcagtctgaacccctcagcacagagcagcctagctccaatgatgaaata
gatatctgggatgggaaaactaagcaagactcatcatcccttcttgacagcaagctgtgc
aactccggcagcggcgctgaaccttgcaacatggagggccaacaattttctttgtccttt
tcccgcaacactcaatctcaattggtgggatctggtcttggcaatatggggaacacatgc
ttcctaaactcaattcttcagtgtgtcacccatacagtcccactttttctcaggcttcgt
tccactgatcactgtgctccatgctcatatgataaagatggtttctgttcattctgtgct
cttaaagaacatattgatgaatcaatccgaaggtctggatctgttataaggccagtgagg
ttcagagataatttaaggaaattatcatcagattttagaccaggacaacaggaggatgca
catgagttcctacgttgtttgctggacaacctggataagtgcaccactgatcccaagcca
aaggataagccctcatcttttgatgaagaaagtattgttaagcaggtttttggaggccga
ctaaaaagcaagttgacttgctgtgagtgtggacactgctcggagacatatgagcccttc
ttggatcttagcctggagattgatcaggctgataaccttattgatgccttggaatctttt
accaagttggagcgaattggggatgctgaggacaagctgaactgtgaacattgtaatgca
aaagtttgtaagaacaagcaacttatgcttgatagatcaccagatgtcgttgccattcat
ttaaagcgtttcaccagccttgatagatctgttgaaaagattgacaaacatgtggtgtac
ccactagaacttgatttgaagccattccattgtgatcctgacatcaataaggagctgaaa
tatgatctttatggcgttgttgagcattctggttcacctagctatggccattatgtttgt
tctgttcgttcttcaccgagcacttggcatctaatgaatgactcccatgttgatttgatt
agtgaggcaagcgcgctgaaccaggaagggtatattctgttttatattaggcagggcaaa
tttcagtggttttcaagtttgctggagcaaaaggatgacctgcatcctgaaaatacgagt
ggtgcatctcccgtttcagtattggagaatatagatgtggattgtccaacatcctctggt
gaagcaaccaacagttctggtgataaattagagaaagatgaaactagtcaatgcaaaaca
tctttccttgaggagccagctaagggatgcccgattgatggtatcaacaaggctgaccta
aaagatgaaatcgtgccatgcatatcatctcatcacgattgtgtggctaataggtgtcct
ggtagtgctgctgacattaccaatttggacagaccctcaactccttcgccaaaacgcaag
cgtttcttctctgatgataatgagtttaatgtgtttgagtttgaggacttcggtgacgaa
gatgagacccctctgcttggaaaccttaaattcacatcaaaagctaagaaggctaaggtt
gaatcagcatctaaatcgacgaagggcccttgcatagataagaacgtaacacgattagta
aggagtatgccgtccactcggagaaaaggcattgtggactgcttgagccaactcaatgca
gagcaggattctggaagctgtcctcggagtcaccctcttggcaaaaagaagctcggcatc
ccggttccaatcaaatggtag
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