Oryza sativa japonica (Japanese rice) (RefSeq): 4341682
Help
Entry
4341682 CDS
T01015
Name
(RefSeq) probable GMP synthase [glutamine-hydrolyzing]
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
4341682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
osa03400
]
4341682
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
4341682
DNA repair and recombination proteins [BR:
osa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
4341682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
4341682
NCBI-ProteinID:
XP_015641809
UniProt:
A0A0P0WZD8
LinkDB
All DBs
Position
6:complement(26569402..26572469)
Genome browser
AA seq
428 aa
AA seq
DB search
MAASMAGAPRVRSLNVAETDADARPVLVPGGNKARSGPAAARKPSPKPLRKADTAARTPE
KPAAAAAAAAPPAKEEEGAKKNAGGGVGKGSSPLPSPRRAQPQPPPARKAAHDAPVHLNL
SLNASCSSDASVESLRGRDSSGGRLERSWSRVAPAVPRRGKTPVKAAAAAAAAEKVAADA
EVVAPATPEAGKRRCAWVTPTSDPCYVIFHDEEWGVPVHDDRRLFELLVLSGALAELTWP
EILKRRQLFREIFVDFDPVAISKINEKKLVAPGSVANSLLSEQKLRAVVENARQILKIVD
EFGSFDRYCWGFLNHKPIVSKFRYPRQVPVKSPKADMISKDMVRRGFRGVGPTIIYSFMQ
AAGLTNDHLVSCFRFKECNEAPTLCTSDTSNANSEADLSADELRTKICSKEMAAKAELLR
TIGTLIIS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttccatggccggagcgccgagggtccggtcgctgaacgtggcggagacggac
gcggacgcgaggccggtgctggtgccgggtggcaacaaggccaggtcgggccccgccgcc
gcccggaagccctcgccgaagccgctgcggaaggcggacacggcggcgaggacgccggag
aaacccgccgccgccgccgccgccgccgctcctccggccaaggaggaggagggcgccaag
aagaatgccggcggcggcgtgggcaagggctcgtcccccttgccgtcgccgaggcgggcg
cagccgcagccgccgccggcgaggaaggcggcgcacgacgcgcccgtgcacctcaacctg
tcgctcaacgcgtcctgctcctcggatgcctccgtggagtcgctccgcggccgggactcc
tccggtgggaggctggagaggagctggtccagggtggcgcccgccgtgccgaggcggggg
aagactccagtgaaggcggcggcggcggcggcggcggcggagaaggttgccgccgatgcg
gaggttgtcgcaccggccacaccggaggcggggaagaggaggtgcgcgtgggtgactccg
accagtgatccttgctatgtcatcttccatgatgaggagtggggtgttccagttcatgat
gacaggagattgtttgagctgcttgtactgtctggtgcattggccgagctcacatggcct
gaaattcttaaaaggaggcaacttttcagggaaattttcgtggacttcgatcctgttgct
atctctaaaataaatgagaagaagcttgtagcaccaggaagtgttgccaactcccttctg
tcagagcaaaaactccgagcagttgttgaaaatgctcgacagatacttaagattgtagat
gaatttggatccttcgatcgatactgttggggctttttgaaccacaagccaatagtgagc
aaattccgatatccaaggcaagtccctgtcaagagccccaaggcagacatgatcagcaaa
gacatggtccgaaggggtttccgaggcgtgggcccaacaatcatatattccttcatgcag
gcagcagggctgaccaatgatcaccttgtcagttgctttcggttcaaagaatgcaatgaa
gctccaactctttgcacgagtgatactagcaatgcaaattcagaggcagatctaagtgca
gatgaactgagaacaaaaatctgcagcaaggagatggctgcaaaagcagagctgttgagg
acgatcggtacgcttatcatttcatag
DBGET
integrated database retrieval system
