KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 9272141
Entry
9272141           CDS       T01015                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    9272141
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:osa03400]
    9272141
DNA repair and recombination proteins [BR:osa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     9272141
SSDB
Motif
Pfam: HD HD_assoc_2 GyrB_insert
Other DBs
NCBI-GeneID: 9272141
NCBI-ProteinID: XP_015621836
LinkDB
Position
1:498457..506254
AA seq 580 aa
MKHPSRIKLASPNKSHGLPYLLPVSAGFLPFSHRLACLLAFPIPISHQPQTAANPTSARP
HRNLARFSEEEMGEYCGAAPEEDPAMALVTPLPTTTTTTTTAAAAAIKQPHYYGCFDRCS
TKQVFDNLHGNISLDPLAREFVDTEEFQRLRDLKQLGLTYLVYPGAVHTRFEHSLGVYWL
AGEAMNNLRLYQGEELGIDRVDMQTVKLAGLLHDIGHGPFSHLFEHEFLPRVVPGSTWTH
ENMSALLLDSIVDKHQIDIEADHLKIVMEMIVASSKFTATESTKEKRFLYDIVANGRNGI
DVDKFDYIGRDCRACGLGCNFQYWRLLQGMRVMGDEICYPAKDYLSIHKLFTTRADLHRT
VYTHAKVKAVELMLVDALVEANEYLGIALHAQDPADFWKLDDTIIKSIETAPNDELNKAK
GIIQRIRRRELYKFCNEYSVPKDKLEHFKNITAQDIVCSQKSSKVLLKEEDVAVSNVKID
LTRGKDNPLERFLIYKPTFQTLIFLRATYQILTCYFCWSAYLLSPASSSLRILVAMRSSP
SQMSGSATCYLRTTRTELSGSTPRSTSWLKRCQKPSRTYN
NT seq 1743 nt   +upstreamnt  +downstreamnt
atgaaacatccctcccgcattaaattggcatctcctaataaatctcacggacttccatat
ctactcccggtttctgctggattccttcctttttctcatcgcctcgcctgcctcttggcc
ttccccatccccatctctcatcagccgcaaactgctgcaaaccccactagcgctcgcccc
caccgtaatctcgcgcgattctcggaggaggagatgggcgagtactgcggcgctgctccg
gaggaggaccctgccatggccctcgtcacgccgctccccaccaccaccaccaccaccacc
acggcggcggcggcggccatcaagcaaccccactactacggctgcttcgaccgctgctcc
accaagcaggtcttcgacaacctccacggcaacatctcgctcgacccgttggctcgtgag
tttgtggatacggaggagtttcagaggctgcgggatctaaaacaacttggccttacatat
ctggtctacccaggagccgttcacacacgttttgagcattcattaggtgtctattggcta
gctggggaggctatgaacaatcttcgactgtaccagggagaagagcttggcattgaccgt
gttgatatgcaaactgtaaaacttgcaggccttttgcatgacattggacatggccccttc
agtcatttgtttgaacatgagtttcttcctcgtgttgttcctggatcaacctggacccat
gaaaatatgtctgcactgttgctggacagcattgtcgacaaacaccaaatagacattgaa
gctgatcatctcaaaattgttatggaaatgattgttgccagctctaagttcactgcaaca
gaaagcacaaaggagaagcgctttctttatgacattgttgctaatggtcggaatggtatc
gatgttgacaagtttgactacattggccgtgattgcagagcatgtggtctgggttgtaat
ttccagtactggaggctcttacaaggcatgcgagtcatgggtgatgaaatatgctaccct
gccaaagattatttgagcatccataaattgtttacgacacgtgctgatcttcaccgcact
gtctatacacatgcgaaagtcaaggctgttgaactgatgcttgtggatgcacttgttgag
gctaacgaatacttgggaatagctttgcatgcacaagatccagcggacttctggaagtta
gatgacacgatcattaaaagcattgaaactgctcccaacgatgaactgaacaaagcaaaa
gggatcattcaacgtattcgccgaagagagctctataagttctgcaatgaatattctgtt
ccaaaggacaagctggagcactttaagaatataaccgcacaagacatagtttgttcacag
aaatcttccaaggtgctgctgaaggaagaagatgttgctgttagcaatgttaagattgat
ttgacccgtggaaaagataatccccttgaaaggtttttgatttataaacccacttttcag
actcttatatttcttagggcgacatatcagattctgacctgttacttttgttggtctgca
tatctactatccccagcatcaagttctttaaggattttggttgcgatgagaagttcccca
tcacagatgagcgggtcagccacctgctacctgcgtacaaccaggacagaattgtccggg
tctacgccaagaagcacgagctggttgaagcggtgtcagaagccttcgagaacctacaac
tga

DBGET integrated database retrieval system