Octopus sinensis (East Asian common octopus): 115209209
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Entry
115209209 CDS
T07665
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
115209209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
osn03400
]
115209209
Enzymes [BR:
osn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
115209209
DNA repair and recombination proteins [BR:
osn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
115209209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT_2
BRCT
RNA_ligase
LIG3_BRCT
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
115209209
NCBI-ProteinID:
XP_029633322
UniProt:
A0A6P7S553
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All DBs
Position
LG3:complement(143031072..143059958)
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AA seq
907 aa
AA seq
DB search
MDVAQTDKPVETKISDKVHFEELTGLLEKIKKAQGIEKKKQNLRLFLDQWRQKHKELHKG
KKTTDSFYPVMRLLLPHLENERVAYGIKEHTFAKLLIKVLCLGKNSPDASKLLNFNTKRE
ANNDFASVAYYVLKNRCPKNGNLSISDVNKCLDDIAVSNTSKKHDVVHETMLHLLRNMTA
IEQKWLIRMVMKELKVGLSQNSIFGVYHPDAEEMFNVNNNLEKVCLQLSDPNIRSHEIAI
SLFTPFSPMLGETAHPNKISEVLSGKPYLIETKFDGERIQLHKQNDDYSYFSRNGHNYSK
TFGASAFQGTITQYIHESFLPGIHSCILDGEMLGYNSDTGEFGTKANHYDIKSADSGDYN
PCFIVFDILLHNDKVLTNLPITERLPYIRETIAPISGRIQISHYKKGVSKADCIEALNKA
IDDREEGIMIKDCESVYRPKARREGWFKVKPEYVDGLMDQLDLLIIGGYRGTGHRSGLMS
HFLLALAKSPKDGEKPNIFHSFCKVGSGYTKNELTELNEKLYKHWKKSDENPPKSIVLAP
GFKEKPSVWIEPSKSCIVQVKAAEIVSSDKFQTGCTLRFPRVEKIRDDKSWFECMTTRDL
EDLKQKSGGKLSNKLDENVDDTTPVKKKRTVAPKVEKKGVMERFKPSDTSHVKMVHNIFD
QKDICVANGPKLWDKAKLEKHVVQYGGQIVQNPDSQTYCVLADKKTYQVNHYIKSNIYNI
INVSWFLDCIENKKLLPWTPKNIIHATKATIAKIREDFDEYGDNYTYHSTYQDLKDVFST
MQLPKCLSPEEIAEIEDEYFPMESPYGLFRLCKVYVDNKLDPNDDNYLQHSPLTLLAMEM
RYFGATVLPVLDNSVSHLIMDKNHLERLDMFKYKRCQSEKKFHILNSEWVKECIREGCLC
PEKLFLL
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgctcagacagacaaacctgttgagactaaaatttctgataaagtccatttt
gaagagttaacaggtctgcttgagaaaataaagaaagctcaaggaattgagaaaaagaag
cagaatttgaggctatttcttgatcaatggcgacaaaaacataaggaactgcataaaggc
aagaaaactactgattcattttacccagtgatgcggcttttacttcctcacctggaaaat
gaacgtgttgcttatggaatcaaagaacatacatttgcaaaacttttaattaaagtatta
tgtcttgggaaaaacagtccagatgcttctaaacttctaaattttaatactaaaagagaa
gctaacaatgattttgccagtgtagcctactatgtgctgaagaaccgttgtcccaaaaat
ggtaacctgagtatctcagatgtgaacaaatgtttggatgatatcgcagtctccaatact
agcaagaaacatgatgttgtacatgaaacaatgcttcaccttttgcgcaacatgactgcc
attgaacagaagtggttgatccgcatggtaatgaaggaactaaaagttggtttgagtcaa
aattccatatttggtgtatatcaccctgatgctgaagagatgtttaatgtgaacaataat
cttgaaaaggtctgtttacaactatcagatcctaacatcagatctcatgagattgccatt
tcattatttactccattttcaccaatgttaggagaaactgctcacccaaacaagatttct
gaagtattgtctgggaagccctatttgattgagactaaatttgatggtgaaaggatacag
cttcacaaacaaaatgatgactatagttacttctctcgaaatggacataattattcaaaa
acatttggagcatctgcctttcaaggcaccattacacaatacattcatgagagctttctt
cctggtatccattcctgtatcttagatggagaaatgcttggatacaactcagacactggc
gagtttggaaccaaagccaatcattatgatatcaaatcagctgacagcggtgattacaac
ccgtgtttcatagtctttgatattctattgcataacgataaagtcttgacaaatttacca
atcacagagcgcctaccatacatacgagagaccattgcacccatcagtggtagaatacag
attagtcactataaaaaaggtgtatccaaggctgactgcattgaagccttgaacaaggca
atcgatgaccgagaagaaggaataatgataaaggactgtgaatcagtgtatcggcccaaa
gcccgacgagagggatggttcaaggtaaaaccagaatatgttgatggtttgatggatcaa
cttgacttactgattattggtggctacagaggcacaggacatcggtccggactaatgtct
cacttcctccttgctcttgcaaagtcacctaaagatggtgaaaaaccaaatatatttcat
tctttctgtaaggttgggtcaggatatacaaaaaatgaattaactgaactcaatgaaaaa
ttatacaaacactggaaaaagagtgatgaaaacccacccaagtcaattgttttggcacct
ggattcaaagagaaaccatctgtttggattgaaccttctaaatcatgtattgtacaggta
aaggcagcagaaattgtatcaagtgacaagtttcaaactggttgcaccctccgtttccct
cgagtagagaagattcgtgatgataaatcttggtttgaatgtatgacaactagggacttg
gaagacctgaaacagaaatcaggaggtaaactgtccaacaaattagatgaaaatgtggat
gatacaacacctgtcaaaaagaagagaacagtggcgcccaaagtagagaaaaaaggagtg
atggagagattcaaaccttctgatacctctcatgtgaaaatggtacacaatatctttgat
caaaaggacatctgtgtagcgaatggtccaaagctttgggacaaggctaaactagagaaa
catgtagtgcagtatggaggacaaattgtacagaacccagattcccagacatactgtgtg
ttggctgacaagaagacttaccaagtgaaccattatatcaaaagtaatatttacaacatc
attaatgtcagctggtttttagattgcattgaaaataaaaagctgcttccttggactccc
aaaaatatcatccatgcaacaaaggccacaattgctaagataagagaagactttgatgag
tatggagacaattatacttatcactcaacatatcaggacttgaaagatgtcttttctaca
atgcaattgcctaaatgtctaagtcctgaagagattgcagaaatagaagatgaatatttc
ccaatggagtctccatatggattgttcaggttgtgcaaagtatatgtggacaacaaattg
gaccctaatgatgacaattaccttcagcattctccattaacattgttggctatggaaatg
aggtatttcggagccacagttctgccagtattggacaattcagtatcccacttgataatg
gacaaaaatcacctagagaggttggatatgttcaaatataaacggtgccaatcagaaaag
aagttccacatccttaattcagaatgggtcaaagaatgtataagagaaggttgtttatgt
ccagaaaagttgtttttgctgtaa
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