Ostreococcus tauri: OT_ostta06g02150
Help
Entry
OT_ostta06g02150 CDS
T01358
Name
(RefSeq) von Willebrand factor, type A
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ota
Ostreococcus tauri
Pathway
ota03022
Basal transcription factors
ota03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OT_ostta06g02150
09124 Replication and repair
03420 Nucleotide excision repair
OT_ostta06g02150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ota03021
]
OT_ostta06g02150
03400 DNA repair and recombination proteins [BR:
ota03400
]
OT_ostta06g02150
Transcription machinery [BR:
ota03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
OT_ostta06g02150
DNA repair and recombination proteins [BR:
ota03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
OT_ostta06g02150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
zf-FPG_IleRS
Motif
Other DBs
NCBI-GeneID:
9835471
NCBI-ProteinID:
XP_003079848
UniProt:
Q017B7
LinkDB
All DBs
Position
6:complement(359424..360668)
Genome browser
AA seq
414 aa
AA seq
DB search
MTLIGAEGGGSESDSDEIDAERAQASLRAWEKKYQSERAWEDLEEDPLTGRLRVNARAVE
LRARERRAKMASAALRGGAAKGMMRFAYVVVDLSRAANEEDFRPNRLSVVGHCAAAFVRE
FFNQNPLSQLGIIVARNGVAERLTELSGSPEAHCAALRNALDASGDFSLQNTLNAARTSL
KSIPSYGSREVLYIMSSLATCDPGNVWTEIQATKAAKVRVSVVAVAAELHVARRLSEETG
GTYGVSMNADHLDDLIMAHAPPPPLAEDATKSCLVQMGFPQKKHVSKDALIVGTRGDYVC
PRCSGRIDELPSQCTVCRLTLVSSPHLARSYHHLFPVPAFKEYASRNVSAKESGIVALEC
SACLASITDASLASECEHCSNVFCFACDIFIHERLHNCPHCSCATHVESRKKAS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcatcggcgccgagggcgggggctcggaatcagactccgatgaaatcgacgcc
gagcgcgcgcaggcgtcgttacgcgcgtgggagaagaagtaccagagcgaacgcgcgtgg
gaagacttggaggaagatcctctcaccggacgcctgcgcgtgaacgcgcgcgcggtggag
ctgagagcgcgggagcgccgggcgaagatggcgtccgcagccttgcgaggcggcgcggcg
aaggggatgatgcggttcgcgtacgtcgtcgtggatttgagtcgcgcggcgaacgaggag
gatttcagaccgaaccgcctgagcgtcgtcgggcactgcgccgcggcgttcgtgcgggag
ttttttaatcagaacccgttgagtcagttggggatcatcgtggcgaggaacggggtggcg
gagcgtctgacggagctgagcgggagtccggaggcgcactgcgcggcgttgcggaacgcc
ctggacgcgagcggagattttagcctgcagaacacgttaaacgcggcgcggacgtcgttg
aagtcgataccttcgtacgggagtcgggaggttctgtacattatgagctcgctcgcgacg
tgcgatccagggaacgtgtggacggagatacaggcaaccaaggcggcgaaagtgcgcgtg
agcgtcgtcgccgtcgcggccgagctgcacgtcgcgagaagattgtcggaggaaacgggt
gggacgtacggggtgagtatgaacgcggaccatctggacgatttgatcatggcgcacgcg
ccgccgccaccgctcgccgaggacgcgaccaagtcgtgtctggtgcagatgggatttccc
cagaagaagcacgtgagcaaggacgctctgatcgtgggcacgcgaggcgattatgtttgt
ccgagatgctccggacgaatcgacgaacttccgtcgcagtgcaccgtatgtcggttgacg
ctcgtgtcatcgccgcacctcgctcgatcatatcaccatctgttccctgtccccgcgttc
aaggagtacgcgagccggaatgtgtccgctaaggagagtgggatagtcgcattggagtgc
tccgcatgtctcgcgtcgatcaccgacgcgagtttagcttccgagtgcgagcactgttcg
aatgtgttttgcttcgcgtgcgacattttcatccacgagcgactgcacaactgtccacac
tgctcgtgcgcaacgcacgtggagtcgaggaaaaaggcatcatag
DBGET
integrated database retrieval system
