Ostreococcus tauri: OT_ostta10g01720
Help
Entry
OT_ostta10g01720 CDS
T01358
Name
(RefSeq) Zinc finger, RING/FYVE/PHD-type
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ota
Ostreococcus tauri
Pathway
ota04120
Ubiquitin mediated proteolysis
ota04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
OT_ostta10g01720
04120 Ubiquitin mediated proteolysis
OT_ostta10g01720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ota04121
]
OT_ostta10g01720
Enzymes [BR:
ota01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
OT_ostta10g01720
Ubiquitin system [BR:
ota04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
OT_ostta10g01720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-ANAPC11
zf-RING_11
zf-RING_5
FlxA
zf-C3HC4_4
zf-RING_4
MIX23
zf-C3HC4_3
Prok-RING_4
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
9832336
NCBI-ProteinID:
XP_003081606
UniProt:
Q010A2
LinkDB
All DBs
Position
10:276749..278740
Genome browser
AA seq
663 aa
AA seq
DB search
MRLAKYVAVSVIATTLVIAHAMYTREQYFPAMMYLSTSKMALVAFGNLAFGAALVLGRAV
KATFLGQLREAEVERLYERTRDAVMETCLAMTIFREEFNARFVAMFVGLLFVKAFHWLYT
DRVQYAETAPTLSRVTHIRLAGFMGTLLLVDVSMLSYIIGNTIAKGPSVLLLFGFEYVIL
VTKLVVGAVKYLIISADRVLDGQWQGKGTCVFYLELVTDLLQLFVYFVFFLIIFAYYGLP
VHLVRDLYMTYRNFRKRVEEFIRYRRVTANLDDRFPDSNTEDLSTSDDVCIICRENMEVG
AQGGNKPKKLPCGHSFHLHCLRSWLERQQACPTCRHSVLPERERRANAVRQAEEEAQWQQ
LPPELQAGYVAPEVVERLDREAAERRAQAGQTTPPNAHSDRARRHSTTLPRTPEQAPGED
PNAPTPERRMSPNAQFRTPPSDRTQISNRFNSPSQAWQSPHTFAATHAANSARGSVEGLG
TMDDEMAHRVATAVASAVAAASAQAQLAFASVAPFGVPGLVESVTAHASGVAAPPTTPIP
STSEQSRPSFSPIPRNASPAVRVAMEAERQATLDSMQAQVRLIQAQMATLQVQASEEERG
IVARTVNRGKETLTDDDDADNRASETSHLIPLTENQPPRREDENEDSNDPAGILRRRRLQ
HFA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcgcgaagtacgtcgccgtctccgtcatcgcgacgacgctggtgatcgcgcac
gcgatgtacacccgtgagcagtacttcccggcgatgatgtacctgtcgacgagcaagatg
gcgctggtggcgttcgggaacttggcgttcggcgcggcgctggtgttgggacgcgcggtg
aaggcgacgtttcttggacagctcagagaagcagaggtcgagcgattgtacgagcgcacg
cgagacgcggtgatggaaacatgcctggcgatgacgatctttcgagaggagttcaacgcg
aggttcgtggcgatgttcgtggggttgctcttcgttaaggcgtttcactggttgtacaca
gatcgggtgcagtacgcggagacggcgccgacgctcagtcgcgtgacgcacattcgtctt
gcgggattcatggggacgcttttgcttgttgatgtgagcatgctgagttacattatcggg
aacaccatcgcaaaggggccgagcgtgttgctgttgtttgggtttgagtacgtcatcctc
gtcacgaagctcgtcgtcggcgccgtgaagtacttgattatcagcgccgatcgcgtgctg
gacggacagtggcagggtaagggcacctgcgtcttctacctcgagctcgtcaccgatctg
ttgcagctctttgtgtactttgtcttctttttgattatcttcgcctactacgggctacca
gtgcatcttgtgcgagacttgtacatgacatataggaactttaggaagagggtggaggaa
ttcattcgctatcgtcgggtgacggcgaatttggacgatagattccccgattcgaacacg
gaagatttgtccacgagcgatgatgtgtgcatcatctgtcgtgagaacatggaggttggc
gcgcagggtgggaacaagccgaagaagctgccgtgcgggcactcgttccatctgcactgt
cttcgctcgtggctggagcgacagcaggcatgtcccacgtgcaggcactctgtgctacca
gagcgcgagcgacgagcgaacgcagtgagacaggctgaggaagaggcgcagtggcaacaa
ctgccgccagagcttcaggcgggctacgtggctccagaagtcgtagagagactcgatcgc
gaggcggcggagcgtagagcgcaagcagggcagacaacgccacccaacgcgcattctgac
agagcccgacgtcactcaactaccctgccgcgcactccggagcaggcgcccggagaggac
cctaacgctccgacgccggagcggcgtatgtcgccgaacgctcaattccgcacaccaccg
tcagatcggacgcagatatcgaatcgtttcaattctccatcacaggcatggcaatcgcca
cacacattcgcggcgacacatgcggcgaattctgcgagaggtagcgtcgaaggtctcggt
accatggacgatgaaatggcgcacagggtggccaccgctgtggcatccgcggttgccgcc
gcgagcgcgcaggcgcagctcgctttcgcgagcgtcgcaccatttggtgtgcctgggctg
gtagaatcagtcacggcacatgcctcaggcgtcgcagcgccacccacgacgcccattcct
tcgacgagtgagcagtcgcgtccatcattttcgccaattcctcgtaacgcgtcacccgcc
gtcagagtcgccatggaagctgaacgccaggccaccctggattccatgcaagcacaagtg
cgtctcatccaggcacaaatggctacgctccaggtacaggcgagcgaagaggaacgcgga
atagtcgccagaaccgtcaatcgcggaaaggagacactcacggacgatgacgatgctgac
aatcgggcgagtgaaacctcgcacttaatccctctcaccgagaatcaaccaccgcgacgc
gaagatgaaaacgaagactcgaacgatccagccggtatccttcgtcgtcgccgcttacaa
cacttcgcatag
DBGET
integrated database retrieval system