Ostreococcus tauri: OT_ostta13g01140
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Entry
OT_ostta13g01140 CDS
T01358
Name
(RefSeq) Replication protein A, C-terminal
KO
K10739
replication factor A2
Organism
ota
Ostreococcus tauri
Pathway
ota03030
DNA replication
ota03420
Nucleotide excision repair
ota03430
Mismatch repair
ota03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OT_ostta13g01140
03420 Nucleotide excision repair
OT_ostta13g01140
03430 Mismatch repair
OT_ostta13g01140
03440 Homologous recombination
OT_ostta13g01140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ota03032
]
OT_ostta13g01140
03400 DNA repair and recombination proteins [BR:
ota03400
]
OT_ostta13g01140
DNA replication proteins [BR:
ota03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
OT_ostta13g01140
DNA repair and recombination proteins [BR:
ota03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
OT_ostta13g01140
MMR (mismatch excision repair)
OT_ostta13g01140
DSBR (double strand breaks repair)
HR (homologous recombination)
OT_ostta13g01140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
RMI2
CDC24_OB3
TOBE_2
Neurexophilin
Motif
Other DBs
NCBI-GeneID:
9837467
NCBI-ProteinID:
XP_003082587
UniProt:
Q00X67
LinkDB
All DBs
Position
13:192980..193990
Genome browser
AA seq
262 aa
AA seq
DB search
MYGGESATQFAGATGYMGEPDASGMKPRASGGNQPNTMTPVTVKMIKGALDARASPDDEI
KVNGMAIMNITLVGKVVDVQTKGSQVVYRLDDSTGQTDVKVWLDSDGPVEEIPRGAYVRV
YGTPKAVGADQVIAAHTTESIRVITDFNEITYHLLEVIYASGYAAKVKSGGGATGVAPQS
VYSAVQAAPNVAADGDMNGSLCDRVLFIVKNNPNGDTGISVLEVVEKLGGQFTDAAVRQE
LESLSNDGAVYTTVDEDHYQAV
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcggtgaatcggcgacgcagttcgcgggagcgacgggatacatgggagagccc
gatgcgagcgggatgaagccgcgcgcgagcggcgggaaccagccgaacacgatgacgccg
gtgacggtgaagatgattaaaggggcgttggacgcgcgcgcgagcccagacgatgagatc
aaagtgaacgggatggcgatcatgaacatcacgctcgtgggcaaggtggtcgacgtccaa
acgaaggggtcacaggtggtgtacaggttggacgacagcacgggccaaacggacgtcaag
gtgtggttagactctgacgggccggtcgaagagattccgagaggtgcgtacgttcgagtc
tacggaacgccgaaggcagtcggggccgatcaagtgattgccgcgcacacgacggaatcg
atccgcgtgataacggatttcaacgagatcacgtaccacctcctcgaggtcatctacgcg
agcggctacgccgccaaggtcaagtccgggggcggcgccaccggtgtggcgccacaaagt
gtgtacagcgccgtgcaagcggcgccgaacgttgcggctgatggtgacatgaacggttcg
ctctgcgatcgcgttctcttcatcgtcaagaataaccccaacggcgacaccggcatctct
gtgttggaggtcgttgagaagttgggcggtcagttcactgatgccgccgttcgtcaggag
ctcgagagtttgtcgaacgatggtgccgtgtacaccaccgtggacgaagaccactaccaa
gccgtctaa
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