KEGG   Ostreococcus tauri: OT_ostta17g00960
Entry
OT_ostta17g00960  CDS       T01358                                 
Name
(RefSeq) Like-Sm (LSM) domain
  KO
K18749  protein LSM14
Organism
ota  Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:ota00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ota03019]
    OT_ostta17g00960
Messenger RNA biogenesis [BR:ota03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     OT_ostta17g00960
SSDB
Motif
Pfam: LSM14 SM-ATX FDF FliG_C
Other DBs
NCBI-GeneID: 34946514
NCBI-ProteinID: XP_022840439
LinkDB
Position
17:163459..164853
AA seq 417 aa
MDRSFIGSTIYLISHSDIRYEGVLVNIDPVESTLTLQNVRSFGTEGRRTNGVQIPPSVEV
YECITFKGDDIKDLEIREGGGGAARAAAAAPTPAPEQPQYGYAQPQYGYAGYPPQQYGYA
GYPPQQYGMPQPGYAGYPPQQYGMPPQQYGAPAWGQQAPEQPAAPPAVPPAQPPAQPPAP
AQPAAPVATAPPKNPWGNPNAAKPAQTEGVILPAARNPAPAGAGVAKTAATVPAPKAPAP
KPKPTSFAAAALNALSPEEAAKLKATPKVMQPQQSGGRGVPAPRAGGRGAPAPRGAAPAV
PKEAFDFQKMLKMFNKEKLANSAEAKKLTSAVAANPVYVKDDFFDTMSSEATEKAQGGNR
GRFHEQRRMDAMTFGFEAVSANQAANRTANAATVAGRGGRGGRGAPTGGRGGRGGRR
NT seq 1254 nt   +upstreamnt  +downstreamnt
atggaccgctcattcataggttcaaccatttacctcatctcgcactcagacattcgttac
gagggcgtcctggtgaacatcgacccggtggagagcacgctgacgttacaaaatgtgcga
tcgttcgggacggagggacgacgaacgaatggagtgcagattccgccaagcgtggaagtg
tacgagtgcatcacgtttaagggggatgacatcaaggatttggagattcgcgagggcggc
ggcggggcggcgagagcggcggcggcggctccgactccggctccggagcagccgcagtac
gggtacgcgcagccgcagtacggatacgcgggatacccgccgcagcagtacggatacgcg
gggtatccgccgcagcaatacggtatgccgcagccaggatacgcgggttaccctccgcag
cagtacggtatgccgccgcagcaatacggcgcgcccgcttggggacagcaagctcccgag
cagccggcagccccgcccgcggtgccgccggctcaaccgccggctcaaccgcccgctccg
gcccagccggccgcgccggtcgccaccgccccgccgaagaacccttggggtaacccgaac
gcagccaaaccggcgcagactgagggcgtgatccttccggctgctcgtaaccctgctccc
gccggcgccggcgtggctaagaccgccgccacggttcccgccccgaaagcccccgccccg
aaacccaagcctacgtccttcgccgctgccgcgctgaacgcgctgtcgccggaggaggcg
gccaagctcaaggcaacgcccaaggtaatgcagccgcaacagagtggcggtcgcggtgtt
ccggccccaagagccgggggacggggtgcgcctgctcctcgcggtgcggcaccagctgtg
cccaaggaggcgttcgatttccagaagatgttgaagatgttcaacaaggaaaagttagcc
aactctgccgaggcgaagaagctcaccagcgcggtggcggccaacccggtgtacgtcaag
gatgacttcttcgacacgatgagcagcgaagccaccgagaaggcgcagggaggaaacagg
ggtcgattccacgaacaacgtcgcatggacgccatgacctttggcttcgaggcggtgagc
gcgaaccaagcggcgaaccgcaccgcaaatgcggctacagtcgcgggacgaggcggcaga
ggcggcagaggcgctcccaccggcggccgcgggggtcggggcggtcgtcgatag

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