Ostreococcus tauri: OT_ostta18g01890
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Entry
OT_ostta18g01890 CDS
T01358
Name
(RefSeq) Ribulose bisphosphate carboxylase, small chain
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
ota
Ostreococcus tauri
Pathway
ota00630
Glyoxylate and dicarboxylate metabolism
ota00710
Carbon fixation in photosynthetic organisms
ota01100
Metabolic pathways
ota01110
Biosynthesis of secondary metabolites
ota01200
Carbon metabolism
Module
ota_M00165
Reductive pentose phosphate cycle (Calvin cycle)
ota_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
OT_ostta18g01890
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
OT_ostta18g01890
Enzymes [BR:
ota01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
OT_ostta18g01890
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_small
CSS_CxxC
VTC
zinc-ribbon_6
Motif
Other DBs
NCBI-GeneID:
9838379
NCBI-ProteinID:
XP_022840588
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All DBs
Position
18:325101..327218
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AA seq
325 aa
AA seq
DB search
MSAVAQVQQVAKTVAVSTGKVANAKSMMIWRPHGNKMFETFSFLPPLSDAEIAKQCQYLL
NNGWTPCIEFEDAEHAYADGHGWSNLDSSINSLYYDNRYWVMWKLPMYGCQNTDEVLAEV
NMAKKCFPDCYIRVVGFDNIKQVQCAGFLVYRPASAKMSAVAQVQQVAKTVAVSTGKVAN
AKSMMIWRPHGNKMFETFSFLPPLSDAEIAKQCQYLLNNGWTPCIEFEDAEHAYADGHGW
SNLDSSINSLYYDNRYWVMWKLPMYGCQNTDEVLAEVNMAKKCFPDCYIRVVGFDNIKQV
QCAGFLVYRPASGAACAVDKRQIQG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgtcgcccaagttcaacaagtcgccaagaccgtcgccgtctccaccggcaag
gtcgccaacgccaagtccatgatgatctggcgcccgcacggcaacaagatgttcgagacc
ttctccttcttgccgccgctctccgacgccgaaatcgccaagcaatgccaatacttgctc
aacaacggctggactccgtgcatcgagttcgaagatgccgagcacgcctacgctgacggc
cacggctggtccaacctcgactcttccatcaactccctgtactacgacaaccgctactgg
gttatgtggaagctccccatgtacggctgccaaaacaccgacgaggtgctcgccgaagtc
aacatggccaagaagtgcttcccggactgctacatccgcgttgtcggcttcgacaacatc
aagcaagtccaatgcgctggcttcttggtgtaccgcccggcctccgcaaagatgtccgcc
gtcgcccaagttcaacaagtcgccaagaccgtcgccgtctccaccggcaaggtcgccaac
gccaagtccatgatgatctggcgcccgcacggcaacaagatgttcgagaccttctccttc
ttgccgccgctctccgacgccgaaatcgccaagcaatgccaatacttgctcaacaacggc
tggactccgtgcatcgagttcgaagatgccgagcacgcctacgctgacggccacggctgg
tccaacctcgactcttccatcaactccctgtactacgacaaccgctactgggttatgtgg
aagctccccatgtacggctgccaaaacaccgacgaggtgctcgccgaagtcaacatggcc
aagaagtgcttcccggactgctacatccgcgttgtcggcttcgacaacatcaagcaagtc
caatgcgctggcttcttggtgtaccgcccggcctccggtgcggcgtgcgccgttgacaag
cgccaaatccaaggttaa
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