Onychostruthus taczanowskii (white-rumped snowfinch): 121332487
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Entry
121332487 CDS
T07590
Symbol
DDX41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
121332487 (DDX41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otc03041
]
121332487 (DDX41)
Enzymes [BR:
otc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121332487 (DDX41)
Spliceosome [BR:
otc03041
]
Complex C
Other components
Complex C specific factors
121332487 (DDX41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
ResIII
UTP25
ERCC3_RAD25_C
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
121332487
NCBI-ProteinID:
XP_041253915
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MEAAAERKRQREEPADTSDLSGEDDDDYVPYVPVKQRKQQMLQKLLQMRRKVVSEEEQRD
SRSEQRGDEDDIPLGPQSNISLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRA
LMSVKEMAKGITYDDPIKTSWRAPRYILGMSEARHDRVRKKYHILVEGEGIPPPIKSFKE
MKFPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLE
QEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDGLPPLRCALCIGGMSVKE
QMETIKHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYF
KGQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVVQEVEYVKEEAKMVYLL
ECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRDGKKDV
LVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVL
MDLKALLLEAKQKVPPVLQVLHCGDETMLDINGERGCAFCGGLGHRITDCPKLEAMQTKQ
VSNIGRKDYLAHSSMDF
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgcggcggagcggaagaggcagcgcgaggagccggcggacacgtccgacctg
tccggagaggatgatgacgactacgtgccctacgtgcccgtcaagcagcgcaagcagcag
atgctgcagaagctgctgcagatgcggcggaaggtggtgtccgaggaggagcagcgggac
agcaggagcgagcagcgcggggacgaggatgacatcccgctgggaccgcagtccaacatc
agcctgctggaccagcaccagcacctcaaagagaaggcggaagctcggaaggagtcggcc
aaggagaagcagctgaaggaggaagagaagatcctggagagcgtggcagagggccgagct
ctcatgtcggtgaaggagatggccaagggcatcacctacgatgacccaatcaaaaccagc
tggagagctcctcgctacatcctgggcatgtcggaggcacggcacgaccgcgtgcgcaag
aagtaccacatcctggtggagggggagggcatcccaccccccatcaagagcttcaaggag
atgaagttcccagcagctatcctgagaggcttgaagaaaaaaggaatccagcagccaacg
cccatacagatccaaggcatccccacaatactctcaggaagggatatgattggcattgca
ttcactggttctgggaagaccttagtgttcaccctgccggtgatcatgttctgcctggag
caggagaagaggctgccattctctaagcgagagggaccctatgggctcatcatctgtccc
tcgcgggagctggcccggcagacccacggcatcctggagtactactgtcgtctgctgcag
gaggatgggctgcccccgctgcgctgcgccctctgcatcgggggcatgtctgtcaaggag
cagatggagaccatcaaacatggggtgcacatgatggtggcaacccccgggcgcctgatg
gacctgctgcagaagaagatggtgagcctggacatctgccggtacctggccttggatgag
gctgacaggatgatcgatatgggctttgagggggacatccgtaccatcttctcctacttc
aagggccagcggcaaaccctcctcttcagtgccacaatgcccaagaagatccagaacttt
gccaagagtgccctggtgaagcccatcaccattaacgttgggcgagcgggtgctgccagc
ctggatgttgtgcaggaggtggagtatgtgaaagaggaggctaagatggtgtacctgctg
gagtgcctgcagaagacccctccacctgtgctgatctttgctgagaagaaggcagatgtc
gatgcaatccacgagtacctgctgctcaagggtgtggaagctgtggccatccatggaggg
aaagatcaggaagaacggacaaaagccattgaggccttccgggatgggaagaaggatgtc
ctggttgccactgacgtcgcttccaagggcctggacttcccagccatccagcacgtcatc
aactacgacatgccagaggagatcgagaactatgttcaccgcatcgggcgtacgggtcgt
tcaggcaacaccggcatcgccaccaccttcatcaacaaggcctgtgacgagtcagtgctg
atggacctgaaggccctgctcctggaggcaaagcagaaggtgccacctgtgctccaggtg
ctgcactgtggggatgagaccatgctggacatcaatggtgagcggggctgtgccttctgt
ggcggcctgggccatcgcatcaccgactgccccaagctggaggccatgcagaccaagcaa
gtcagcaacatcggccgcaaggactacctggcccacagctctatggacttctag
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