Onychostruthus taczanowskii (white-rumped snowfinch): 121332592
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Entry
121332592 CDS
T07590
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03022
Basal transcription factors
otc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121332592
09124 Replication and repair
03420 Nucleotide excision repair
121332592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otc03021
]
121332592
03400 DNA repair and recombination proteins [BR:
otc03400
]
121332592
Transcription machinery [BR:
otc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
121332592
DNA repair and recombination proteins [BR:
otc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
121332592
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
IBR
C1_2
VWA_3
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
121332592
NCBI-ProteinID:
XP_041254108
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRLNEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGLIVTKSKRAEKMTEL
SGNSKKHVTALKKAVDMNCSGEPSLYNSLNLAMQTLKHMPGHTSREVLVVLSSLTTCDPA
NIYDLIKCLKAVKIRVSVIGLSAEVRVCTVLARETGGTYHIILDESHYKELLMHHVSPPP
ASSTSECSLIRMGFPQHTIASLSDQDAKPSFSMAQLENNSDPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEVPLEEYKGERYCQGCQGEMKDQNVYIC
KVCQNAFCVECDVFVHDALHCCPGCIHEHPAPVSV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgagcccgagcggaccaagcgctgggaaggaggctatgaaagaacgtgggaa
attcttaaggaagacgaatccggctcgttgaaggcaaccatcgaggacattctcttcaag
gcaaagaggaaaagactcaatgagcaccatggacaagttcggcttggaatgatgcgtcac
ctttacgtggttgttgatggatcaagaacaatggaggaccaagacttaaaaccaaacaga
cttacttgcactctgaagttactggaatattttgttgaagagtactttgaccagaatcct
attagtcagattggcttaattgtaaccaagagtaaaagagcagaaaaaatgacagaactc
tcaggaaactcaaaaaagcatgtaactgctctgaagaaagcagtggatatgaattgcagt
ggagagccttctctgtataattccctcaatttggccatgcagactttaaagcacatgcca
ggacatacgagcagagaggttttggtggtcctcagcagtctgacaacatgtgatccagcc
aacatctatgatctaattaagtgtttaaaagcagtaaagatcagagtatctgtcatcggc
ctaagtgctgaagttcgagtttgtacagtacttgcccgagaaactggtggaacataccac
attattttggatgaaagtcattataaggaactgctgatgcaccatgtcagtcctccacct
gccagttcaacttctgagtgttcccttattcgaatgggttttcctcagcatactattgct
tctctgtctgatcaagatgcaaagccctcctttagcatggcgcaattggaaaataacagt
gacccaggtcttactctaggtggatatttttgtccgcagtgcagagccaaatactgtgag
cttcctgtggaatgcaaaatctgtggtcttacattagtgtctgcacctcacctggctcgg
tcttaccatcacttgtttcctttagatgcctttcaggaagttccactggaagaatacaaa
ggggaacggtattgtcaaggctgccagggagaaatgaaagatcaaaatgtgtacatatgc
aaagtgtgtcagaatgcattttgtgtggaatgcgatgtgtttgttcatgatgcgctgcac
tgctgtcctggctgtattcacgagcaccctgctcctgtatctgtatga
DBGET
integrated database retrieval system
