Opitutus terrae: Oter_3618
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Entry
Oter_3618 CDS
T00689
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
ote
Opitutus terrae
Pathway
ote03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ote00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Oter_3618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ote03400
]
Oter_3618
DNA repair and recombination proteins [BR:
ote03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Oter_3618
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Oter_3618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
MEDS
Kinesin
P-loop_SecA
DUF87
SWI2_SNF2
HEM4
AAA_16
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
ACB76895
UniProt:
B1ZWE7
LinkDB
All DBs
Position
complement(4702273..4704306)
Genome browser
AA seq
677 aa
AA seq
DB search
MLFKLHADYQPTGDQPQAIEQLVASIHAGNRHQTLLGVTGSGKTFTMANVIARCERPTLI
ISHNKTLAAQLYSEFKNFFPENAVEYFVSYYDYYQPEAYIASSDTYIEKDSSINEEIERL
RIAATSSLVSRRDVVVVASVSCIYGLGSPEEFTELRIPLRRGEQLGRHRFLERLVDNIYD
RNDYELKRGTFRVRGDVVDVMPAYLEHGLRVEFFGDEVEAITEFDPVSGKVLRNLEQFDL
YPANQYVTSRGRLDPAIRSIKAELDERVAYFEQKGQYLEAQRVRMRTNYDLEMLQEMGFC
NGIENYSRHLTGRKAGERPFCLIDFFPKDFLLMIDESHATVPQIGGMFNGDRARKQTLVD
FGFRLPSALDNRPQTFEEFEQITHQALYVSATPAEFELKRSTVVAEQLVRPTGLLDPEIV
IRPTKGQVENLIGEIKAAAAAGERVLVTTLTKRLSEDLTSYLREAKIRVEYLHSDIDAIE
RVEILRNLRLGNFDVLIGINLLREGLDLPEVALVAILDADKEGFLRSETSLVQTAGRAAR
HEKGRVIFYADNITESIRRTVEIVKYRREKQLAYNVEHGITPRSVKRAAQASLHVYDGSG
ERDEAAVAEEVDDVAAVIAELEDEMQEAAGRLEFERAAVLRDQINALKSGEYRKPAKPLA
AKYPSRKPRAKASGRRR
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcaaactccacgccgactaccagccgacgggcgaccagccgcaggcgatcgag
cagctcgtggcctcgatccacgccgggaatcgccatcaaacgctgctcggcgtcaccggc
tccggcaaaaccttcacgatggccaacgtgattgcgcggtgcgagcggccgacgctgatc
atctcgcacaacaagaccctcgcggcgcagctctattccgagttcaagaatttcttcccg
gagaacgcggtcgaatacttcgtcagctactacgactactaccagcccgaggcctacatc
gcgtcgagcgacacctacatcgagaaggactcgtcgatcaacgaggagatcgaacggctg
cggatcgcggcgacgagttcgctcgtgtcgcggcgcgatgtggtggtcgtggccagcgtg
tcgtgcatctacggcctgggctcgccggaggagttcaccgagctgcggattccgctccgg
cgtggcgaacagctcggtcggcatcgcttcctcgaacggctggtcgacaatatttacgac
cggaacgactacgagctgaagcgcggcacctttcgcgtgcggggcgacgtcgtcgacgtg
atgccggcgtatctggagcacggactgcgcgtcgagtttttcggcgacgaggtcgaggcg
atcaccgagttcgatccggtttccggcaaggtgctgcgcaatctcgagcaattcgatctt
tacccagcgaaccagtatgtcacctcacgcggccggctcgacccggcgatccgctcgatc
aaggcggagctcgacgagcgcgtggcctattttgagcaaaaaggccagtatctcgaggcg
cagcgggtccggatgcggaccaactatgatctggagatgctgcaggaaatgggcttctgc
aacggcatcgagaactactcgcggcatctcaccggtcggaaggcgggcgagcggccgttc
tgcctgatcgactttttcccgaaggattttctgctgatgatcgacgagagtcacgcgacc
gtgccgcagatcggcggcatgttcaacggcgatcgcgcgcgcaagcagacgctggtcgat
ttcggcttccgactgccgtcggcgctggacaaccggccgcagactttcgaggagttcgag
cagatcacgcaccaggcgttgtatgtctcggccacgccggccgagttcgagctgaagcgt
tcgacggtcgtcgcggagcagctcgtccgaccgacggggctgctcgaccccgagatcgtg
attcggccaacgaagggacaggttgagaacctgattggcgaaatcaaagccgccgcggcc
gcgggcgagcgcgtgctcgtgacgacgttgaccaagcggctgtcggaagacctgacgagt
tatctgcgcgaggcgaagatccgcgtggaatatctgcactcggacatcgatgcgattgag
cgcgtcgagatcctgcgcaatctccggctgggcaacttcgacgtgctgatcgggatcaac
ctgctgcgcgaaggcctcgatctacccgaagtggcgctggtcgcgatcctggacgcggac
aaggaaggcttcctccgcagtgagacgagcctggtgcagacggcaggccgcgcggcgcga
cacgagaaagggcgcgtcatcttttatgccgacaacatcaccgaatccatccgccgcacg
gtggagatcgtgaagtaccggcgggaaaaacagctcgcctacaacgtcgagcacggaatc
acgccgcggagcgtgaagcgcgcggcgcaggcgagcctgcatgtttacgatggaagtggc
gaacgcgacgaggcggcggtggctgaggaagtcgatgacgtcgccgccgtgatcgccgag
ttggaagacgaaatgcaggaggcggcgggccggctggagttcgagcgcgccgcggtgctg
cgcgatcagatcaacgcgctcaagtcgggcgagtatcgcaagccggcgaaaccgctcgcc
gcgaaatatccgagtcggaaaccgcgagccaaggcgagcggccggcggcggtaa
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integrated database retrieval system
