Ottowia oryzae: C6570_09065
Help
Entry
C6570_09065 CDS
T05363
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
otk
Ottowia oryzae
Brite
KEGG Orthology (KO) [BR:
otk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
otk01011
]
C6570_09065
Enzymes [BR:
otk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
C6570_09065
Peptidoglycan biosynthesis and degradation proteins [BR:
otk01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
C6570_09065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
DUF2153
Motif
Other DBs
NCBI-ProteinID:
AVO34360
UniProt:
A0A2S0MEU4
LinkDB
All DBs
Position
complement(1949228..1950955)
Genome browser
AA seq
575 aa
AA seq
DB search
MKWSYLLALTASVWLAGCAAPGTSGDASSPFGTTKPGARQPASGDMSPVSVTELHSNGVA
PLDAPADLWVRIRRGYAMPDLDTDLVRQQEAWYNSRPDYIQRMTERSRMYIFHIVEELEL
RGMPTELALLPYIESAFNPQAVSSAKAAGMWQFMPATGSSFDLRQNMLRDDRRDVIASTR
AALDYLQKLHDRFGDWHLALAAYNWGQGNVNRAIERNKAAGLGTGYLDLNMPAETRNYVP
KLQAVKNIIARPESYGAILPLIENHPFFDTVDITKDIDVDVAARLAEVRVEDFRALNPSF
RKPVIFAAGTPQVLLPWNNAVIFNRNLAQADAQSLASWTAWVAPSNMPSREVASRFGMDE
ESFREMNSIPRGMLIKTGSTVLVKRSSGAAPAVASHVVNNAQLSYTPEIVLRRTSVRARK
GDTIASVAGRYDLPASTVAGWNKRPANASLKRGQAVVLYLPVRAAAAAAASEAGNSPRSK
SRVERASQPSGREAAASGRNARHNKAEATSARSGSGRSTANAKSAAAGKSGGKAAAKSAA
KPTAQSTKGAAKSAPAAKAAAQSSGKSTAKAKGKH
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggtcctatctgctggcgttgaccgccagcgtctggctggccggctgcgccgca
cccggcacttccggcgatgcttcctccccctttggcacgaccaaacccggcgcgcggcag
ccggcttcgggcgacatgtcgcccgtgagcgtgaccgaacttcattccaacggcgtggcc
cctctggacgcaccggccgatctgtgggtgcgcattcggcggggctacgccatgccggac
ctggacaccgatctcgtgcgccagcaagaggcctggtacaacagccggcccgactacatc
cagcgcatgaccgagcgttcgcgcatgtacatcttccacatcgtggaagagctggaactg
cgcggcatgccgaccgagctggcgctgctgccctacattgaatcggccttcaacccgcag
gccgtctccagtgccaaggctgctggcatgtggcagttcatgcccgccacgggcagctcg
ttcgatctgcgccagaacatgctgcgcgacgaccggcgtgacgtgatcgcgtccacccgc
gccgcgctggattacctgcaaaagctgcacgaccgctttggcgactggcacctggcgttg
gcggcgtacaactggggccagggcaacgtgaatcgcgccatcgagcgcaacaaggccgca
ggcctgggcacgggttacctcgacctgaacatgcccgccgagacgcgcaactacgtgccc
aagctgcaggcggtcaagaacatcatcgcgcgccccgaaagctacggcgccatcctgccg
ctgattgaaaaccacccgttcttcgacacggtggacatcaccaaagacatcgacgtggat
gtggcggcccgcctggccgaggtgcgcgtcgaagacttccgcgcgctgaacccgtcgttt
cgcaagccggtgatcttcgcggccggcacgccccaggtgctgctgccgtggaacaacgcg
gtgatcttcaaccgcaatctggcgcaggccgatgcgcagtcgctggcgtcatggacggct
tgggtcgcgccttccaacatgccttcgcgcgaggtggccagccgattcggcatggatgag
gagagcttccgcgagatgaacagcatcccgcgcggcatgctgatcaaaacgggttcgacg
gtgctggtcaagcgcagcagcggtgcggcgccggccgttgcgagccatgtggtgaacaac
gcgcagctgtcgtacacgcccgagatcgtgctgcgccgcacctcggtgcgggcacgcaag
ggcgacacgattgccagcgtggccggccgctacgacctgcccgcctccaccgtcgccggc
tggaacaagcgccccgccaacgccagcctgaagcgcggccaggccgtggtgctttacctg
ccggtgcgtgctgcggccgccgcagccgccagcgaagcaggcaactcgccgcgcagcaaa
tcgcgcgtcgagcgcgcctcgcaacccagcgggcgcgaagctgcagccagcgggcgcaac
gcgcgccataacaaggccgaggccacttccgcacgttcgggcagcggccgttcgacggcc
aacgccaagtctgccgcggccggcaaatcgggtggtaaagccgccgccaaatcggcggcc
aagcccacagcccaatccaccaaaggcgcagccaaatccgcgcccgcggccaaggcagcg
gcgcagtcttccggcaagtccaccgccaaggccaagggcaagcactga
DBGET
integrated database retrieval system
