KEGG   Ottowia oryzae: C6570_17050
Entry
C6570_17050       CDS       T05363                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
otk  Ottowia oryzae
Pathway
otk02024  Quorum sensing
otk03060  Protein export
otk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:otk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    C6570_17050
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C6570_17050
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C6570_17050
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:otk02044]
    C6570_17050
Enzymes [BR:otk01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     C6570_17050
Secretion system [BR:otk02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   C6570_17050
  Eukaryotic Sec-SRP protein
   C6570_17050
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_16 APS_kinase AAA_22 AAA_33 cobW AAA_31 GTP_EFTU AAA_17 AAA_30 AAA_24 AAA_19 nSTAND3 T2SSE AAA_18 KTI12 YqeC ResIII ParA ArsA_ATPase Helicase_RecD AAA_14 AAA_28 DO-GTPase1 TsaE Thymidylate_kin ATPase Rad17 6PF2K RNA_helicase
Other DBs
NCBI-ProteinID: AVO35737
UniProt: A0A2S0MIU4
LinkDB
Position
complement(3729412..3730830)
AA seq 472 aa
MATALTDKLSSLVKKISGQARITESNVQDMLREVRMALLEADVALPVVRDFIARVKDKAM
GQEVLGSLKPGQALVGIVNRELAATMGEGISDLNLAAQPPAVILMSGLQGSGKTTTTAKL
ARHLVQKRKKKVLTVSGDVYRPAAIEQLKTVTAQAGADWFPSTPDQKPLDIASAALTHAK
THFYDVLIVDTAGRLAIDEALMQEIKALHGALNPVETLFVVDAMQGQDAANTAKAFKDAL
PLTGIVLTKIDGDSRGGAALSVRQITGAPIKFAGVSEKIDGLEVFDAERHAGRILGMGDV
VALVEQVTANVDIEAAKKLAEKVKSGSGFDLQDFLGQLQQMKQMGGLGSLMDKLPTQLAA
KASDADLSRAEKDIRRKEGIINSMTALERKKPDLLKASRKRRIAAGAGVHVQEVNRLLKE
FEQMQGMMKQMKGGGLMKMMKRFGGMKGLMGGGGMPPMPPGMGGPGGGKLPF
NT seq 1419 nt   +upstreamnt  +downstreamnt
atggccacagcccttaccgacaaactctccagcctggtcaagaaaatctctggccaggcg
cggatcaccgaatccaacgtgcaggacatgctgcgcgaggtgcgcatggccctgctggag
gccgacgtggccttgcccgtggtgcgcgacttcattgcccgcgtcaaggacaaggccatg
gggcaggaggtgctgggcagcctgaagcccggccaggcgctggtgggcatcgtcaaccgc
gagctggccgccaccatgggcgagggcatcagcgacctgaacctggccgcgcagccgccc
gccgtcatcctgatgtccggcctgcagggctcgggcaagaccaccaccacggccaagctg
gcgcgccacctggtgcaaaagcgcaagaaaaaggtgctgaccgtgtcgggcgacgtgtac
cgcccggccgctatcgagcagctgaaaaccgtcactgcgcaggccggggccgactggttc
cccagcacgcccgaccagaagccgctggacatcgccagtgccgcgctgacgcacgccaag
acgcacttctacgacgtgctgatcgtcgacaccgccggccgcctggccattgatgaagcg
ttgatgcaggaaatcaaggccctgcacggtgcgctgaacccggtcgaaaccctgttcgtc
gtcgatgccatgcagggccaggacgcggccaacaccgccaaggcgttcaaggacgcgctg
ccgctcaccggcatcgtgctgaccaagatcgacggcgattcgcggggcggtgctgcgctg
tcggtgcggcagatcaccggcgcgccgatcaagtttgcgggcgtgtctgaaaagatcgac
ggcctggaggttttcgacgccgagcggcacgccggccgcattttgggcatgggtgacgtg
gtggcgctggtcgagcaggtgaccgccaacgtcgacatcgaagccgccaagaagctggcc
gagaaggtcaagagcggtagcggctttgacctgcaggatttcctgggccagttgcagcag
atgaagcagatgggcggcctgggcagcctgatggacaagctgcccacgcaactggccgcc
aaggcgagcgacgccgacttgagccgcgccgaaaaagacatccgccgcaaggaaggcatc
atcaacagcatgaccgcgctggagcgcaagaagcccgacctgctcaaggccagccgcaag
cgccgcatcgctgccggcgcgggcgtgcatgtgcaagaggtcaaccgcctgctcaaggag
tttgagcagatgcagggcatgatgaagcagatgaagggcggcggcctgatgaagatgatg
aagcgtttcggcggcatgaaaggcttgatgggcggcggcggcatgcccccgatgccgccg
ggcatgggcggcccgggcggcggcaagctgccgttctga

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