Oryzomicrobium terrae: OTERR_10080
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Entry
OTERR_10080 CDS
T06190
Symbol
selB
Name
(GenBank) selenocysteine-specific elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
otr
Oryzomicrobium terrae
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
otr03012
]
OTERR_10080 (selB)
Translation factors [BR:
otr03012
]
Eukaryotic type
Elongation factors
OTERR_10080 (selB)
Prokaryotic type
OTERR_10080 (selB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
SelB-wing_3
SelB-wing_2
GTP_EFTU_D2
bact_SelB_WH_2nd
HTH_IclR
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
QEL64484
UniProt:
A0A5C1E785
LinkDB
All DBs
Position
1109267..1111273
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AA seq
668 aa
AA seq
DB search
MLIGTAGHIDHGKTTLIRALTGVDTDRLPEEKRRGISIQLGYAYLPDGAAGEGAGTGSAA
DFGFIDVPGHEKFIPTMLAGAAGIDLALLVVAADDGVMPQTREHLAILTLLGIAQGGVAI
TKCDRADAARIAQVEREVAALLAGTPLAGSPCFPVAAANGPADPGVATLKTWLLAQGGDT
GAARDKVDGRGFRLAIDRSFALAGAGTVVTGTAFAGRVQVGDKLTVFAPERGVAATVRVR
SLHANNRPADAGHAGQRLALALVGIDHGAVERGDWLVADFLARPAERTRVDVRLSLLADA
PRPLTHWSAVHLHHGAAQVTARVALLNETGTLAPGDSGYAQLVLDRPLAVCHGDRLVLRD
GAAQATLAGAVALDPFGPARRRKSPERLALLATLEVADPQRRLHALIDAAPWGVDLAELA
CAHNLAAAAHVPSDLALPPGAVLAPRAGRVFSATRWQALQDVVAARLAAHHEAFADEVGV
ERERLRRMALPQLASTAFFDLLEALRDAGRIVLSGAAWHLPEHTVELDARERLRAEKLLP
WLRDEPFDPPWVRDIAQRLGEPESETRRLLKKLAARGEAYQVVKDLFYAPEALSRLVAIV
ASLAGAGEEGSEPGRLGLVKAADFRDATGLGRKRAIQILEYFDRVGYTRRIGSGAAQAHG
LRGEPPVR
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcggcaccgccggccacatcgaccacggcaagaccaccctgatccgtgccctg
accggcgtcgacaccgaccggctgcccgaggaaaaacgccgcggcatctccatccagctc
ggctacgcctacctgccggacggggcggcgggggagggggctggtacaggtagcgccgcc
gacttcggcttcatcgatgtgccgggccacgagaaatttatccccaccatgctcgccggc
gccgcaggcattgacctggccctgctggtggtggccgccgatgacggggtgatgccccag
acccgggagcacctggccatcctcaccctgctcggcatcgcccagggcggcgttgccatc
accaagtgcgaccgggcggacgctgcccgcatcgcccaggtggagcgagaggtggccgcc
ctgctggcgggcacgcccctggccggctcgccctgcttcccggtggccgccgccaacggc
ccggccgacccgggcgtggcgaccctcaagacctggctgctggcccaaggtggcgatacc
ggcgcggcgcgggacaaggtggatggccggggctttcgcctcgccatcgaccgcagcttc
gccctggccggcgccggcaccgtggtcaccggcaccgccttcgccggccgggtgcaggtc
ggcgacaagctcaccgtgttcgccccggagcgaggggtggcggcaacggtgcgggtgcgc
agcctgcatgccaacaaccggccggccgacgccggccatgccggccagcgcctggctctg
gccctggtgggcatcgaccacggcgccgtggaacggggcgactggctggtggcggacttc
ctcgcccgccccgccgagcgcacccgggtggacgtgcggctctccctgctcgccgacgcc
ccccggcccctgacccactggagtgcggtgcatctgcaccatggcgccgcccaagtcacc
gcccgggtggccctgctcaacgaaaccggtaccctggcgcccggcgattccggttacgcc
cagttggtgctcgaccggcccctggcggtgtgtcacggcgaccggctggtgctgcgcgac
ggcgccgcccaagccaccctggccggggcggtggccctggacccctttggcccggcgcgg
cggcgcaagagcccggagcgcctggccctgcttgccaccctggaagtcgccgatccgcag
cggcgcctgcacgccttgatcgatgcggccccctggggcgtggatttggccgaactggcc
tgcgcccacaacctggccgctgccgcccacgtgccgtccgacctggccttgccgcccggc
gccgtgctggcgccccgcgccggacgggtcttttccgcgacccgctggcaggcgttgcag
gacgtggtggcggcccgcctggccgcgcaccacgaggcctttgccgatgaagtgggggtg
gagcgggagcgcctgcgccgcatggccttgccccagctggcatcgacggccttcttcgac
ctgctcgaagcgctgcgcgatgcgggccgcattgtcctttccggggccgcctggcacctg
cccgaacatacggtggagctggatgcccgggaacgcctgcgggccgaaaagctgctgccc
tggctacgggacgaacccttcgacccgccctgggtgcgcgacattgcccaacgcctgggc
gaaccggaaagcgaaacccggcggctcctcaagaagctggcggcccggggtgaggcctac
caggtggtgaaagacctgttctatgcgcccgaggccctgagccgcctggtggcgatcgtc
gccagcctggccggtgcgggggaagagggcagtgaaccgggccggctcgggctggtcaag
gccgccgatttccgcgatgccacggggctcggccgcaagcgagcgatccagatcctcgaa
tatttcgaccgggtgggctatacccggcgcatcggtagtggcgccgcccaggcccatggg
cttcggggcgagccgccggtcaggtag
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