Oncorhynchus tshawytscha (Chinook salmon): 112218615
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Entry
112218615 CDS
T05605
Name
(RefSeq) leucine-rich repeat-containing protein 4-like
KO
K16351
netrin-G2 ligand
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112218615
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
V-set
ig
LRRNT
Ig_2
Motif
Other DBs
NCBI-GeneID:
112218615
NCBI-ProteinID:
XP_024235324
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Position
LG19:complement(30880600..30885700)
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AA seq
683 aa
AA seq
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MSTVGRVSLQPTWNAALLALLALTMVPALSVCQPAGLGPPPNPQNCPVVCSCTNQIGKVV
CTRRGLVRVPPGIPTNTRYLNLMENSIETIQADTFRHLHHLEVLQLGRNAIRQIEVGAFN
GLTSLNTLELFDNRLTGIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGE
LRRLEYISDGAFEGLQNLKYLNLGMCNLREMPVLSPLTGLEELEMSENTFPEMKPGSFRG
LRSLQKLWIMNSGITVIERNAFDDITALVELNLAHNNLSSLPHDLFAPLQYLVELHLHHN
PWRCDCDVVWLSWWLREYIPTNSTCCGRCHSPAHMRGRYLVEVDQTTFQCSAPFILDAPR
DLNISAERVAELKCLTAAMSSVRWLLPNGTVLTHGSSHPRISVLNDGTLNFSNVLPSDKG
VYTCMVTNMAGNSNASAYLNVSNAELNTSNLSYFTTVTVEVLEPTVEETPKPKPTVPASP
SVFQPVFISTPTMLLQSTQTPRQVSLPTARGPTHPSASLDEVVKTTKIIIGCFVAVTLLA
AAMLIAFYKLRKRHQQRSTVAVARTIEIIQMDEEVPEVPPARSGSSESEEMGLALPTILK
ARYISSSSSSSHRDRDRDKDRDRDRDRAAYGAHWTHNNLGNSLHRSSSRQHHQQHHHSLI
STIAEPYVIKTTHTKEKVQETQI
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgtgggccgggtttctctgcagcccacctggaacgcagccctgctcgccctg
ctagccctcaccatggtgccagctctcagtgtgtgccagcctgccggcctgggtcctccc
cccaacccccagaactgtccggtggtgtgctcctgcaccaaccagatcggtaaggtggtg
tgtacacgccgtggcctggtcagggtgccccccgggatccccaccaacaccagatacctc
aacctgatggagaacagcatcgagaccatccaggctgacaccttcagacacctacaccat
ctggaggtgctgcagctgggcaggaacgccatcaggcagattgaggtgggggccttcaac
ggcctgaccagcctcaacaccctggagctgtttgacaacagactgacggggatccccagc
ggggcttttgagtacctgtccaagctgagggagctgtggctgaggaacaaccccatcgag
agcatcccatcctatgccttcaacagggtgccctctctgatgaggctggacctaggggag
ctcaggaggctagagtacatttctgacggggcctttgagggcctgcagaacctcaagtac
ctgaacctagggatgtgtaacctcagggagatgcctgtcctgtctcccctgactggcctg
gaagagctggagatgtctgagaacactttccctgagatgaagcctggctctttccgcggc
ctgcgctcgctacagaaactctggataatgaactctgggatcaccgtgatcgagaggaac
gcctttgatgacatcacggcgctggtggagctgaatctagcccataataacctgtcatct
ctcccccatgacctctttgccccgctgcagtacctagtggagctccatctccaccacaac
ccctggaggtgtgactgtgacgtggtctggctgtcctggtggctcagggagtacatcccc
actaactccacctgctgcggccgctgccactcccctgcccacatgagaggacgatacctg
gtggaggtggaccagaccacattccagtgctctgctcccttcatcctggatgctccaagg
gacctcaacatctctgcagagagagtggctgagctcaagtgtcttacggccgccatgtca
tcggtccgatggctgctccctaacgggaccgttctgacccatggctcgtctcaccctcgg
atctctgtcctcaatgatggaacgctcaacttctctaacgttttgccgtcggacaagggt
gtctatacttgcatggtgactaacatggcaggtaactccaacgcctcagcctacctgaat
gtcagcaatgccgagctcaacacctccaacctgtcctatttcactacagtgactgtggag
gtgctggagcccaccgtagaagagacccccaaacccaaacccacagtcccagcctcgccc
tcagtgttccagcccgtcttcatctccacgcccaccatgctgctccagagcacccagacc
ccccgccaggtgtctctccccacagcccgtggccccacccacccctccgccagcctggac
gaggtcgtgaagacaaccaagatcattattggctgcttcgttgccgtgacgctccttgcc
gctgccatgttgatcgccttctacaagctgcgtaagcggcaccagcagcggagcacggtg
gcagtggcgcggaccatcgagatcatccaaatggatgaggaggttcccgaggttccaccg
gccaggtcaggttctagcgagtctgaggagatggggctggctctgcccaccatcttaaaa
gcaagatacatctcatcatcctcatcgtcgtcccacagagacagagacagagacaaagac
agagatagagacagggacagagctgcctacggggctcactggacccataacaacctggga
aactccctgcaccgttcctccagccgccagcatcatcagcagcaccaccacagcctcatc
agcaccatcgcagagccctacgtcattaagaccactcacaccaaggagaaggtccaggag
acccagatctaa
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