Oncorhynchus tshawytscha (Chinook salmon): 112218811
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Entry
112218811 CDS
T05605
Name
(RefSeq) liprin-beta-2-like isoform X1
KO
K27096
liprin-beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112218811
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112218811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
FxsA
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
112218811
NCBI-ProteinID:
XP_042157630
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All DBs
Position
LG19:complement(42828563..42924962)
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AA seq
1026 aa
AA seq
DB search
MASDASHMLEAALEQMDDIIAGSKAAAEYTNGLFELGSPGSAGPLQVLQLVEDLRLALEL
QPREEERNTLRAQVPSSTAQMLMDWLDMDRGSDRGSVNLRSPVNNESYQERLVRLEGDKE
SLVLQVSVLTDQVEAQGEKIRDLESSLEEHHHKLNSTEEMLQQELLSRNSLETQKLDLMD
EVSYLKLKLVGMDEKQNHNDSSKDQQNKAECVVNLISELQEQMCRFQEEIHTRIMEKRTM
EAQGESGAREAHDQSPDVGLGGTDMEEFCCCCGGQNGLLQELRLLKSKVDVLEGEKLQYE
RKLKATKVEIADLQQILASKDSEIEGLQSQLVSRGPMTNENPERVEVFRRLLTDQYQEFQ
RLKMGMESLLAANDEKDRHIEELTVLLRQYRKMKEVMALAQVTREKLLVGSSEEELSGSL
KMRALTHKAHSDIIRSEMSSRCSSPLLRSSSSFQKELNSSIQTSLETSMVMVSPSDAGCF
HNGQWSQPQMLSSSLEELQSRSLPKHVVGQPVEAVSENRHMEMNKYQTLPGKLSRPDMNG
DQEQYATPVQLSPDDSEDSELNLRKSERLDESTQSDLSPLSSGVDSGKQSPVSPENKKNH
LGIKKLWGKIRRTQSGTLQREDLEPGEFKRGGLRATASPRLARTGETLTSVWDLKTPFSK
WTPEQVCCWLEESGLDQYVILAQHWANSGQTLLSATPQDLEKEMGIKNPLHRKKLQLALK
SFSTKTTEKSSELDHIWVTRWLDDIGLPQYKGQFHEGRVDGRMIQYLTVNDLLFLKVTSQ
LHHLSVKCAIHVLHVNKFNPNCLKRRPGDENKTSPSEVVQWSNHRVMEWLRSVDLAEYAP
NLRGSGVHGGLIILEPRFNSDTLAMLLNIPPQKTLLRRHLATNFNMLVGSQAQQEKREFM
ESLGYAPLSTTAKVRPKKLGFSNFGHLRKKRCDESTDYICPLEAAQVQAVLNGAHRPYSG
FRGLSPILDRDPDRRQQMAVTEGPVLQIEALSEGINQLTGSREERGAGAVPNIKGRPILV
IRETTL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagatgcaagtcacatgttggaggcggccttggagcaaatggatgacatcatc
gcaggctccaaggctgcagccgagtacaccaacggcctgtttgagctgggctccccaggt
agcgcagggcccctgcaggttctacagctggttgaggacctgaggctggccctggagctg
cagcccagagaggaggagaggaacaccctgagggcccaggtccctagcagcactgctcag
atgctcatggactggctggacatggacaggggctcagataggggctcggttaaccttcgc
tccccggtgaacaatgagagctatcaggagcgtctggttcgcctagagggggacaaagag
tctctggttctccaggtgagcgtgctcacagaccaggtggaggcccaaggagagaagatc
cgagacctggagagctctctggaggagcaccaccacaaactcaactccactgaggaaatg
ctacagcaggagctgctgagccggaattcgttggagacccagaaactagatctgatggat
gaggtttcctacctgaaactgaagctggtcggcatggacgagaaacagaaccacaacgac
agcagcaaggaccagcagaacaaagctgagtgtgtggtaaatctgataagcgagctccag
gagcagatgtgtaggtttcaggaagagatccacacccgcatcatggagaaacggaccatg
gaggcccagggggagagtggtgcccgcgaggcccacgaccagagccctgacgtgggcttg
ggtggcactgacatggaggagttttgctgttgctgtggaggacagaatggcttactgcaa
gaactcaggctcctcaagagtaaagtggatgtgctggagggggagaaattgcagtatgag
agaaaactaaaggccacgaaggtggagatagcagacttacagcagatactggcttccaaa
gactctgagatcgagggccttcagagccagctggtctccagaggcccaatgaccaatgag
aatccagagagagtggaggtctttaggagactgctgacagaccaataccaagaattccaa
aggttgaaaatggggatggagtcgttgttagcagcaaatgatgagaaagaccgtcacata
gaggagctcactgttctcctgagacagtacaggaagatgaaggaggtgatggccctcgca
caagtgactagagagaagctccttgttgggagcagtgaggaggaactgagtgggagtctg
aagatgagagctctcacacataaagctcattcagacatcatccgttcagagatgtcttcc
aggtgctcctctcctctgttaaggtcttcctcatccttccagaaagagctgaactctagt
atccagacctccctggagacgtccatggtgatggtctccccgagcgatgctggctgcttc
cacaacggacaatggtcccaaccacagatgctttcaagcagcctggaggagttacaaagc
agatcgttaccaaagcatgtagtgggtcaaccagttgaagcggtttcagagaatcggcac
atggaaatgaacaaatatcagaccctaccagggaagctatctcgacctgacatgaatggg
gatcaagagcagtatgccacaccagtccagctgtcccctgacgatagcgaggacagtgag
ttgaacctaagaaagtcggagagactggatgagtccacgcagtcggacctgtcccccctg
tcgtctggagtggactcaggaaagcagtctcctgtctccccagagaacaagaagaaccac
ctgggcatcaagaaactctgggggaagattcggaggacccagtctggcaccctgcagaga
gaggaccttgagcctggagagtttaagagggggggactgagagccaccgccagccctcgt
cttgcccggactggagagacattgacctctgtgtgggatttgaagacacccttctccaag
tggactccggagcaggtctgttgctggctagaggagagtgggctggaccagtatgtgatt
ctggcccaacattgggccaacagtgggcagaccctcctctccgccacaccacaggactta
gagaaggaaatggggattaagaatccactgcacaggaagaagctacagttggccctcaag
tccttcagcaccaaaacgactgagaaatcctctgaactggaccacatctgggtcacacgt
tggcttgatgacattggtttacctcaatacaagggtcagtttcacgagggaagagtagac
ggcagaatgattcagtacttgacagtgaatgacctcttgttcctgaaagtgaccagtcag
ctccatcatctcagtgtgaagtgtgctatccacgtcctccacgtcaacaagttcaacccc
aactgcctgaagagaagacctggagatgagaacaagacttctccctcggaggtggttcag
tggtcgaaccacagggtgatggagtggcttcgctcagtggacctggcagaatacgcaccc
aacctgaggggcagcggggtgcacgggggcctcatcattctggagcctcgttttaactca
gataccctggccatgctgctgaacatcccccctcagaagaccctgctgcgacgtcacctg
gccaccaacttcaacatgctggtgggctcccaggctcagcaggagaagagggagttcatg
gagtctttaggctacgctccgctcagcaccacagccaaagtcaggccaaaaaagttgggc
ttctcaaacttcggccacctgaggaagaagaggtgtgacgagtcaacagactacatttgc
cccctggaggcagcccaggttcaggcggtgctgaacggggcccaccggccctactccggc
ttcaggggcctcagccccatcctagacagagacccagacagacggcagcagatggcggtg
acagaggggcccgtgctgcagatagaagctctgtctgagggaattaaccaactcacgggt
tccagagaggagagaggggctggagccgttccaaacatcaaaggcagacccatactggtt
ataagggaaaccaccctctga
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