Oncorhynchus tshawytscha (Chinook salmon): 112225782
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Entry
112225782 CDS
T05605
Symbol
rbfox1l
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112225782 (rbfox1l)
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112225782 (rbfox1l)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
112225782
NCBI-ProteinID:
XP_042164077
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All DBs
Position
LG03:4927820..4944550
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AA seq
393 aa
AA seq
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MLSSPTMILQPYGLPVYPQGAQCYPSLVQGGPGQEACPGSGDPTLPQVYAQPPSYPPPGQ
APPTPAGRLPPLDYSSAHPNSEYQEHHQLRVYQGPQHEGADTLAAISTDDALVPVTSDSQ
ALSVSVSSGGGAGSGSDEEGSGKAQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF
NERGSKGFGFVTFESAMEADRAREKLNGTIVEGRKVEVNNATARIVTKKPQTPLVNGEVS
TPGWKINPVMGAMYAPELYTGEFQFASFPYPVAAPTLAYRGSPLRGRGRAVYNTIRSAAA
AAPTAMPAYPGMSPFSVLYQDGLYGAEVYGGYPAAYRVAQSPSAATATYSDGYGRVYAAA
TDPYHHSVGPTATYGVGTMASLYRGGYNRFTPY
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgctctcttctcctacaatgattcttcagccttacggactgcccgtctatccccagggt
gcccaatgttaccccagcctagtacagggaggccctgggcaggaggcctgccccggcagt
ggtgaccccaccctcccccaggtctatgcccagcctccctcataccctccaccaggacaa
gctcctcccacacctgcaggcagacttcctcctctagactatagttctgcccaccccaac
tcagagtaccaggagcatcaccagctcagagtctatcagggcccgcaacacgaaggggct
gacactctggcagccattagcacggacgatgccctggtcccggtgacctctgactcccag
gctctgagcgtgtcagtgtcatcagggggtggagcaggaagtggtagcgatgaggagggg
tcaggcaaggcccagcccaagcgtctccatgtttccaacatccccttccgcttcagagac
ccggacctcagacagatgtttgggcaatttggcaagatcctggatgtggagattatcttt
aatgagagagggtcaaagggttttgggttcgtgacctttgagagcgcaatggaggcagac
cgagcgagggaaaaactgaacggaacgatcgttgaggggaggaaggttgaggtgaacaat
gctacagccagaatagtcaccaagaagccccaaacaccacttgtgaatggtgaggtttca
acccctggatggaagatcaaccctgtcatgggagcgatgtatgcacctgaactctacacc
ggtgagtttcaatttgccagtttcccctaccccgtagctgctcccaccctggcctatcgg
ggctcaccactgcgtgggcggggccgggctgtctacaacacaattcgctcagctgctgca
gccgcacccactgccatgcccgcctaccctggaatgtctcctttcagtgtgctgtaccaa
gatggattatatggagctgaagtctatggcgggtatcctgcagcgtacagagttgcccaa
tcaccatccgctgccacagcaacatacagtgatggatatggccgagtttatgctgctgca
acggatccctaccaccattcagtgggacccacggcaacatacggcgtcggaacaatggcc
agtctgtacagagggggatacaaccgcttcaccccttactga
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