Oncorhynchus tshawytscha (Chinook salmon): 112227151
Help
Entry
112227151 CDS
T05605
Name
(RefSeq) proline-rich extensin-like protein EPR1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
112227151
NCBI-ProteinID:
XP_024247781
LinkDB
All DBs
Position
LG28:34076530..34081222
Genome browser
AA seq
1258 aa
AA seq
DB search
MWWSCVFVKRDFSPMALKAKGERLSLICLGLVVVVLNSFGQCAAVTQTRSSKSSIVLGPH
LKGDLNNGKEEQSTGAVRFGRLILGRNVKPRNASFSTDEHTVSKVRSSNVSLDDADYQSD
MGWEPKQLGGHVYGTIKQSSPVVESLLQMEPSVECVGDSMKLKVHDTGSTPGSLFSVDRG
NKSPLPLLQLPTNCGHSISTTHQDWIFIAIYNGCYVTLEDGNYVLPLRWWGLPIKMSCPA
KKTFKPNPPTVSCYPEGMVVKMEGGTSAKDLRVKFKGHWQPLMRVSPHCGYSVVAHLEAV
TISAHYEPCVELKDGMFTLELAGEGEVKVSCPVDQSFPRPNYPQTPVFPVPPTIALQRSP
MFPPQPTSPPKPQAPLHPYYTKPATLPPGNPQYYFSFYPLPATPPPATKVPQGHEQHPDY
RHPKPVTSSPPKDPQPPWYSESFYPRPAEPVTRMPGELPPATEAPNDKVYYPYDRYPYDP
QPAKPVTHFPVIQRPATEKPTSPLHPYYTQPATLPPGNPQYYFSFYPLPATPPPATKVPQ
GHEQHPDYRHPKPVTGSPPEDYQIPWEFFDRQPAKSVTQPTPAILPPATEKPTAPLRPYY
LKPDTLPPGNPQYYFSFYPLPVTPPPQVSTPATKAPQGHVQHPYYPHPLYPPHPKPVTSS
PPKDPQIPWDSFAPQPFKPATYPVTRKPTPAMLPPATEKPTAPLHPYYQQFYPEPAKPIT
IPLRPVTQTPGQTPLVVHTWIPAPQQPSHPRTTKAPPTVAPSSPQPGDSYPPHPGYCPAV
CPTGFLTCCPMPISFHQHHRNHFGSVTSKDSGIIPAYPFKHTSDLFNYASVSGPTQATTT
PQPITVQTVAPTKMTLTGFHDYWSQHGMRFSASLASYAQAPSDANKPSEPQRPKQSHFQP
YNPQQPMRPYFEAPASDSNKPMGQQQPIQPYLPHNPQRLMHAYPLPYNPQGPVQPHGQAP
VYSNKPLELERPASDPSKPSEPQSLSSDLNKPLKPQPSKWPHYPFIPPMWYDPDMFHASK
PLQPHHQTQLSESAMQMHSTLEQLSPHEHPHGPLQPPRPVKELGGSLPSNSKGISSLQQR
NPSGHQMPTHYGSLPIYYAGAKPSYPQKPAAKPSGKPSRPEFPESFEHYWKPIVPLGPNE
GFHVSDPAQSAGGSDPAQSAGGSYPAQSAGGSYPAQSAGGSYPAQSAGGSYPAQSAGGSY
PAQSAGGSYPAQSAGGSYPAQSAGGSYPAQSAGGSYPAQSAGGSYPAQSAGGSYPAAN
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgtggtggtcttgtgtgtttgtgaagcgcgattttagtccgatggcattgaaggcaaaa
ggggagcgtctctctttaatatgtttaggattagttgtggtagtattgaactcctttggt
cagtgcgctgcagtaacacaaacaagatcgtcaaaatcctccattgtcctgggaccccat
ttgaagggggatcttaacaatggtaaagaggagcagtctacaggtgctgtgcgatttgga
aggcttatacttggacgtaatgtcaaaccaagaaatgcgagtttttctactgatgagcat
actgtctccaaagtccgatcctccaatgtttcactggatgatgctgactaccagtctgac
atgggttgggaacctaagcagctgggaggacatgtttatggcacaattaagcaaagtagt
ccagtggtggaaagtctcttgcagatggaaccaagtgttgaatgtgttggcgactccatg
aaactaaaggtccatgacacaggctctacaccaggctctctcttttctgtggaccgagga
aataagtctcccctgcctctgttacagttgcccacaaactgtggtcattccattagcacc
actcaccaggattggattttcattgcaatctataatggctgttatgtcacactggaggat
ggtaattatgttctgcctttgcgttggtggggattgccaattaaaatgtcctgccctgcc
aaaaaaacctttaagcccaaccctcctacggtttcctgctaccctgagggcatggtggtg
aaaatggaagggggcacctctgccaaggatctcagggtcaagttcaaaggacactggcag
ccgttgatgagagtttcgccccattgtggctacagtgtggtagctcatctagaagctgtg
accatttctgctcattatgaaccctgtgtggaacttaaggatgggatgttcactcttgaa
cttgctggcgagggggaggttaaagtgtcctgtcctgttgaccagtctttccctcgcccc
aattacccccaaacccctgtgtttccggttcctcccaccattgcgcttcaacgaagtcca
atgtttcctcctcagcctacttcaccccctaaaccccaggctccactgcatccttactac
acaaagcctgctactctgcctcctgggaaccctcagtattacttttccttctaccctctg
cctgcaactcctccccctgctaccaaagttcctcagggccatgaacaacatcctgactac
cgacatcccaagcctgtaactagctctccacctaaagacccccagcctccttggtattca
gagtccttctaccctcggccagctgagccagttactcgtatgcctggcgaacttccccct
gcaacagaagctccaaatgacaaggtgtactatccttacgaccgatatccttatgaccct
cagccagccaagcctgtaactcattttcctgtgattcaaaggcctgctactgaaaagcca
acatctccactgcatccttactacacacaacctgctactcttcctcctgggaatcctcag
tattacttttccttctaccctctgcctgcaactcctccccctgctaccaaagttcctcag
ggccatgaacaacatcctgactaccgacatcccaaacctgtaactggttctccccctgaa
gactaccaaattccttgggagttttttgaccgtcaaccagccaagtctgtgactcaacct
acacctgccatacttccccctgctactgaaaagccaacagctcccctgcgtccttattac
ctgaaacctgatactctgcctcctgggaaccctcagtattacttttcattctaccctctg
cctgtaactcctccccctcaagtgtctactcctgctaccaaagctcctcagggccatgtg
cagcatccttactacccacatcctctctatccaccacatcccaagcctgtaacaagctct
ccccctaaagacccccaaattccttgggattcctttgcccctcaaccatttaagcctgct
acgtatcccgtgactcgaaagcctacacctgccatgcttccccctgctactgaaaagcca
acagctccactgcatccctactaccaacagttctaccctgagccagctaagcccattaca
atcccacttaggcctgtaactcaaacaccaggacaaacgccacttgtagtccatacatgg
atacctgctcctcaacaacctagtcatccaagaactactaaagcacctccaactgtggct
cctagttcacctcagccaggtgactcttatccaccacatcctgggtattgtcctgcagtc
tgccctactggtttcttgacctgctgccccatgcccatatctttccatcaacaccaccgc
aaccattttggctctgtaacatccaaggatagtggtatcattcctgcttaccctttcaaa
catacatctgacctgttcaattatgcttcagtttctggacctacccaagccactacaacc
ccacaacctataacggttcagacagttgcccccactaaaatgaccttgactggtttccat
gactactggagtcagcatggaatgaggttttcagcctccttggcttcgtatgcccaagca
cctagtgatgccaacaagccctcagaaccccaacgtccaaagcaatcacattttcagccc
tacaacccacagcagccaatgcgcccatattttgaagcacctgccagtgactccaacaaa
cctatgggacagcaacaaccaattcagccatatctgccccataacccacagcggcttatg
catgcatatcctctgccatacaacccacaaggtccagtacagccacatggccaagcacct
gtttattctaacaagcccttggaacttgagcgacctgccagtgatccaagtaaaccatct
gaacctcaatcgctgtctagtgacctcaacaagcccttaaaaccccaaccttcaaagtgg
ccacattatcctttcatacctccaatgtggtatgaccctgacatgttccacgcatccaag
cctctgcaaccacaccaccaaacccaactgtctgaatctgcaatgcagatgcatagcaca
cttgaacaactgagtcctcacgaacatccacatggcccgcttcagcctccaagaccagtc
aaggaactgggtggctcccttcccagtaattcaaagggtatctctagccttcaacaacga
aacccctcaggtcatcaaatgcctacccattacggctcattgccaatatattatgctggt
gccaaaccatcctacccccagaaacctgcagccaagccttctggtaaaccctccagacct
gaatttccagagtcattcgaacactattggaagcccattgtgccactagggcctaacgaa
gggttccatgtctctgacccggcccagtccgcaggaggttctgacccggcccagtccgca
ggaggttcttacccggcccagtccgcaggaggttcttacccggcccagtccgcaggaggt
tcttacccggcccagtccgcaggaggttcttacccggcccagtccgcaggaggttcttac
ccggcccagtccgcaggaggttcttacccggcccagtccgcaggaggttcttacccggcc
cagtccgcaggaggttcttacccggcccagtccgcaggaggttcttacccggcccagtcc
gcaggaggttcttacccggcccagtccgcaggaggttcttacccggccgctaactaa
DBGET
integrated database retrieval system
