Oncorhynchus tshawytscha (Chinook salmon): 112231123
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Entry
112231123 CDS
T05605
Symbol
cdx1b
Name
(RefSeq) homeobox protein CDX-1b
KO
K09312
homeobox protein CDX1/4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112231123 (cdx1b)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
112231123 (cdx1b)
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Ortholog
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GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
Alveol-reg_P311
Motif
Other DBs
NCBI-GeneID:
112231123
NCBI-ProteinID:
XP_024253459
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Position
LG33:29856933..29863488
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AA seq
249 aa
AA seq
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MYVSYLLEKDTSMYPNSVRHPSLNLNHQNFVPAPPQYSDFSGYHQVPGINNDPHHSQTGA
WNPVYAPPTREDWSPYGPGTGPSTSNPGAIGYSPPEFSPVPQPGLLPSSINSSVGQLSPI
SQRRNPYDWMRRSAPPANLGGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELA
TSLCLSERQVKIWFQNRRAKERKVNKKKMQQPQAASTTTPTPPSNVAMVTSSSGGLVSSS
LQMTIKEEY
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagttatcttttggagaaggacaccagcatgtacccaaattcagtgcgacat
cccagcctaaacttgaaccatcagaactttgttcccgcacctccgcagtattcggatttc
agcggataccatcaagttcctgggattaacaatgaccctcaccacagccagactggggcc
tggaaccccgtttacgcaccgccgacccgggaagactggtcgccctatgggccaggtaca
ggaccgtccacatcgaatccgggagcaattggctatagccccccagagttctctccagtc
ccacaacccgggcttctcccgtcgtctatcaactcatctgtaggtcagctctctcccatt
tctcagcgcagaaacccttatgattggatgaggcggagcgcgccaccggcaaatttaggt
ggtaagacacgaacgaaagacaagtaccgggtggtgtacacagatcaccagcgcttggag
ctggagaaggagtttcactatagccgctacattaccatcaggaggaaagcagagttggcc
acctctctctgcctctcagaacgacaggtgaaaatctggtttcagaatcggcgtgccaaa
gagaggaaagtgaacaagaagaagatgcaacagcctcaggcagcgtccacaacaacacct
actccacccagcaatgttgccatggtgaccagcagcagtggtggcctagtgtcttcatcc
ctacaaatgactatcaaagaagaatactga
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