Oncorhynchus tshawytscha (Chinook salmon): 112232295
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Entry
112232295 CDS
T05605
Name
(RefSeq) LARGE xylosyl- and glucuronyltransferase 2
KO
K09668
glycosyltransferase-like protein LARGE [EC:2.4.2.- 2.4.1.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00515
Mannose type O-glycan biosynthesis
otw01100
Metabolic pathways
Module
otw_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
112232295
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112232295
Glycosyltransferases [BR:
otw01003
]
Glycan extension
O-Glycan
112232295
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_49
Glyco_transf_8
Glyco_transf_24
bZIP_2
Motif
Other DBs
NCBI-GeneID:
112232295
NCBI-ProteinID:
XP_042186689
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Position
LG12:54378971..54450820
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AA seq
751 aa
AA seq
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MHMPFRGRLKLLVASLTAVILLTWLYLLAGNLENGRSLLLSPCLSETPEARVLERAVLES
RVREMEEENRQIRLQLSQLQGTAGQPADGGNYGNAAWGASADTGPEDVENTAEERANHTE
CPRSPTVLKCELIHVACVCAGHNASRDVVTLVKSILFHRKNPLHFHFITDAVANQILSSL
FQSWMVPSVQVSFYDADELKSEVSWIPNKHYSGIYGLMKLTLTKALPSDLTKVIVLDTDI
TFATDIAELWAIFRKFTDKQVIGLVENQSDWYLGNLWKNHKPWPALGRGFNTGVILLYLE
RLRRIGWEQMWRLTAERELMSMLSTSLADQDIFNVFIKQNPVLVHQLPCFWNVQLSDHTR
SEQCYTEVSDLKVIHWNSPKKLRVKNKHVEFFRNLYLTFLEYDGNLLRRELFGCPSHATS
ESVQLQGALEELDEDDQCYDFRRERITVHRVHLYFLQYEYTPTGDDTDVTLVAQLSMDRL
QMLEAICKHWEGPISLALYMSDAEAQQFLRYAQASEVLKNRKNVGYHIVYKEGQFYPVNL
VRNVALRNANTPYVFLADVDFLPMYGLYDYLRKSVVQLDMANTKKALVVPAFETLRYRLS
FPKSKAELLSMLDMGTLYTFRYHVWTKGHAPTNYAKWRTATTPYKVEWEVDFEPYVVVKR
DCPEYDQRFVGFGWNKVSHIMELDAQEYDLMVLPNAFMIHMPHAPSFDISKFRSSPGYRY
CLQTLKEEFHQDLSRKYGAAALKYLTAQRNI
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgcacatgccgtttcgaggtcgtctgaagctgctggtggcatctctgaccgccgtcatc
ctgctcacctggctctacctgctggctgggaacctggagaatgggcgttctctcctcctg
tccccctgtttgtcagagacccccgaggcacgggtcctagagcgggcggttctagagtcg
cgggtgcgcgagatggaggaggagaaccggcagatccgcctgcagctcagccaattgcag
ggcacggccggccagcccgccgacggtggtaactatggcaacgcggcgtggggggcgtca
gctgacactgggcccgaggatgtggagaacacggcggaggagagagccaatcacacagag
tgtccccgttcgcccaccgtactgaagtgtgagctgatccatgtagcgtgcgtgtgtgcc
ggtcacaacgccagcagagatgtggtcaccctggtcaagtccatcctgttccacaggaaa
aaccctctccatttccacttcatcacagacgcagtagccaatcagatcctgagttctctg
ttccagtcctggatggttccatctgtacaagttagcttctacgacgcagatgaactcaag
tctgaggtgtcatggatacctaacaagcactactcaggtatctacggcctgatgaagctg
accctaaccaaagcgctgccctctgacctcacaaaggtcatagtcctggatacggacatc
accttcgccaccgacatcgctgagctctgggccatcttcaggaagttcactgacaagcag
gtgataggtctggtggagaaccagagtgactggtacctggggaacctgtggaagaaccat
aaaccctggcccgccctgggacgaggcttcaacactggggtcatcctgctctacctggag
aggctgcgacggattggctgggagcagatgtggaggctgaccgccgagagagagctaatg
agcatgctcagtacctcgctggctgaccaggacatctttaatgtgttcattaagcagaac
ccagtcctagtgcatcagctgccctgcttctggaacgttcagctgtctgaccacacacgc
tccgaacagtgctacacagaggtgtctgacctcaaggtgatccactggaactctcctaag
aaacttcgtgtgaagaacaagcatgtggagttcttcaggaacctctacctaaccttccta
gagtacgatgggaacctactgagacgagagctgtttggctgccccagccatgccacctca
gagagtgtacaattacaaggagctctggaggagctggatgaagacgaccagtgttatgac
ttccggcgggagcgaatcacagtgcaccgcgtgcacctctactttctgcagtacgagtac
acgcccaccggggacgacacggacgtcacgctggtcgcacagctctccatggacaggtta
cagatgctggaggccatatgtaaacactgggaaggccctatcagcttggccttgtacatg
tcagacgccgaggcccaacagttcctgcgttacgcccaggcctccgaggtgctgaagaac
cgtaagaacgtgggataccatatcgtttacaaggagggacagttctaccctgtcaacctg
gtgagaaatgtggccctgaggaacgccaacacaccttatgtgttcctggcagacgtggac
ttcctgcccatgtacggcctctatgattacctcagaaagtcagtggtccagttagacatg
gccaacactaagaaggctctggtggtaccggcctttgagactctgcgctaccgcctctcc
tttcccaaatccaaagccgagctgctctccatgctggacatggggaccctctacaccttc
aggtatcacgtttggaccaagggccatgctcctaccaactacgccaagtggcggacagcc
accacgccctataaggtggagtgggaggtagattttgagccctatgtggtggtgaagcgg
gactgccctgagtatgaccagcgctttgtgggctttggctggaacaaggtctcccatatc
atggagctggatgcacaggagtacgacctgatggttctgcccaatgcgttcatgatccac
atgccacacgcacccagcttcgacatctccaagtttcgctccagcccgggctaccgctac
tgcctgcagaccctgaaagaagagttccaccaagacctgtcccggaagtacggcgcagcc
gccctcaagtacctcactgctcagaggaacatctaa
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