Oncorhynchus tshawytscha (Chinook salmon): 112234949
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Entry
112234949 CDS
T05605
Name
(RefSeq) RNA binding protein fox-1 homolog 3-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112234949
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112234949
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GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
112234949
NCBI-ProteinID:
XP_042163155
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All DBs
Position
LG27:complement(16809363..17295005)
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AA seq
381 aa
AA seq
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METPSWAGNTLCKSGSIAVFGNVVYSGLLNEHLWHLGVPLFTRLGNQEATNPPEAMAQPY
TPAQYPPPPQNGIPAEFAAPHPLPTQDYTGQNRVPEHAMTLYTPTQTHSEPPGTDNNTPA
ITANTTVPTDDVTQSEVSLQLQLQLSDSSEKQQPKRLHVSNIPFRFRDPDLRQMFGQFGK
ILDVEIIFNERGSKGFGFVTFETSTDADRAREKLNGTIVEGRKIEVNNATARVMTNKKVA
NPYTNGWKLNPVVGAVYGPELYAVTGFPYPATGATVAYRGAHLRGRGRAVYNTFRTAPPP
PPIPAYGAVVYQDGFYGAEIYGGYAAYRYAQPTTAAAYSDSYGRVYATADPYHHTIGPAA
TYSVGTMASLYRGGYSRFTPY
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggagacccccagctgggcaggaaacacgttgtgtaaatcaggaagtattgctgtcttc
gggaacgtggtgtacagcgggctgctcaacgagcacctctggcatttaggagttcccctc
ttcacgagactgggtaaccaagaggccaccaaccccccagaagccatggcccagccgtac
acgcctgcccagtacccgcctcccccacagaatggcatcccggccgagtttgcggcaccc
caccccctccccacgcaggactacaccgggcagaacagggtgcccgagcatgccatgacc
ctctacacccccacacagacgcacagtgagccgccgggcaccgacaacaacacgcccgcc
atcaccgccaacacaactgtaccgacagatgacgtgacgcaatcagaggtctccctgcag
ctccagctgcagctctcggactcctcggagaagcagcagcccaagaggttacatgtctcc
aacatccccttccgcttccgtgaccccgacctgcggcaaatgtttgggcaatttggaaag
attctagatgtggagattatctttaacgagcgaggatccaagggctttgggtttgtaact
tttgaaacgagcacagatgccgaccgtgcgcgggagaaactaaacggtacaatcgtagag
ggacgcaaaatagaggtgaataatgcaacagcaagagtgatgacaaacaaaaaagttgcc
aatccgtacacaaatggctggaagctgaaccctgtggtgggagctgtctatggtcctgaa
ctgtatgctgtaacaggtttcccttacccggccacaggggctacggtggcctataggggt
gcccacttgcgaggccgggggcgggctgtgtacaacaccttccgcacagcacctccacca
ccacctattccagcctatggagcagtggtgtaccaggatggcttctatggagcagaaatc
tatgggggctacgctgcgtaccgatacgcccagcccaccaccgctgctgcctacagtgac
agctatggcagagtctatgcaacagcagacccctaccaccacacaatcggccctgccgct
acatacagtgtggggaccatggctagcctatacagaggagggtacagtcgcttcactccc
tactaa
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